Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 AC124947.2-202ENST00000552735 133 ntBASIC3.17□□□□□ -1.9
RTL3Q8N8U3 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.17□□□□□ -1.9
RTL3Q8N8U3 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.17□□□□□ -1.9
RTL3Q8N8U3 ACTR3BP3-201ENST00000565577 979 ntBASIC3.17□□□□□ -1.9
RTL3Q8N8U3 RPL23AP84-201ENST00000571193 464 ntBASIC3.17□□□□□ -1.9
RTL3Q8N8U3 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.17□□□□□ -1.9
RTL3Q8N8U3 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.17□□□□□ -1.9
RTL3Q8N8U3 Z99497.2-201ENST00000603634 310 ntBASIC3.17□□□□□ -1.9
RTL3Q8N8U3 AC018714.1-201ENST00000605028 208 ntBASIC3.17□□□□□ -1.9
RTL3Q8N8U3 AC107294.3-201ENST00000609211 526 ntBASIC3.17□□□□□ -1.9
RTL3Q8N8U3 AC004223.4-201ENST00000612426 332 ntBASIC3.17□□□□□ -1.9
RTL3Q8N8U3 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.17□□□□□ -1.9
RTL3Q8N8U3 AL136981.2-201ENST00000617319 734 ntBASIC3.17□□□□□ -1.9
RTL3Q8N8U3 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.17□□□□□ -1.9
RTL3Q8N8U3 MIR8057-201ENST00000620957 69 ntBASIC3.17□□□□□ -1.9
RTL3Q8N8U3 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.17□□□□□ -1.9
RTL3Q8N8U3 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.17□□□□□ -1.9
RTL3Q8N8U3 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.17□□□□□ -1.9
RTL3Q8N8U3 OR5H6-203ENST00000642105 978 ntBASIC3.17□□□□□ -1.9
RTL3Q8N8U3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.17□□□□□ -1.9
RTL3Q8N8U3 OR4G2P-202ENST00000641004 1759 ntBASIC3.17□□□□□ -1.9
RTL3Q8N8U3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
RTL3Q8N8U3 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.16□□□□□ -1.9
RTL3Q8N8U3 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.16□□□□□ -1.9
RTL3Q8N8U3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
RTL3Q8N8U3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
RTL3Q8N8U3 Y_RNA.548-201ENST00000384656 105 ntBASIC3.16□□□□□ -1.9
RTL3Q8N8U3 SNORD67-201ENST00000390833 111 ntBASIC3.16□□□□□ -1.9
RTL3Q8N8U3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.16□□□□□ -1.9
RTL3Q8N8U3 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.16□□□□□ -1.9
RTL3Q8N8U3 AL022400.1-201ENST00000423946 935 ntBASIC3.16□□□□□ -1.9
RTL3Q8N8U3 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.16□□□□□ -1.9
RTL3Q8N8U3 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.16□□□□□ -1.9
RTL3Q8N8U3 AC125238.1-201ENST00000448842 249 ntBASIC3.16□□□□□ -1.9
RTL3Q8N8U3 USP9YP10-201ENST00000454868 628 ntBASIC3.16□□□□□ -1.9
RTL3Q8N8U3 RPS29P12-201ENST00000460178 152 ntBASIC3.16□□□□□ -1.9
RTL3Q8N8U3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.16□□□□□ -1.9
RTL3Q8N8U3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
RTL3Q8N8U3 AC117522.2-201ENST00000510049 657 ntBASIC3.16□□□□□ -1.9
RTL3Q8N8U3 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.16□□□□□ -1.9
RTL3Q8N8U3 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.16□□□□□ -1.9
RTL3Q8N8U3 SCARNA15.2-201ENST00000516409 127 ntBASIC3.16□□□□□ -1.9
RTL3Q8N8U3 RNU6-232P-201ENST00000517144 64 ntBASIC3.16□□□□□ -1.9
RTL3Q8N8U3 RN7SKP57-201ENST00000517248 293 ntBASIC3.16□□□□□ -1.9
RTL3Q8N8U3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.16□□□□□ -1.9
RTL3Q8N8U3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.16□□□□□ -1.9
RTL3Q8N8U3 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.16□□□□□ -1.9
RTL3Q8N8U3 AL356057.1-201ENST00000533798 831 ntBASIC3.16□□□□□ -1.9
RTL3Q8N8U3 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.16□□□□□ -1.9
RTL3Q8N8U3 TRAV37-201ENST00000553906 342 ntBASIC3.16□□□□□ -1.9
RTL3Q8N8U3 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.16□□□□□ -1.9
RTL3Q8N8U3 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.16□□□□□ -1.9
RTL3Q8N8U3 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.16□□□□□ -1.9
RTL3Q8N8U3 VN1R92P-201ENST00000598511 928 ntBASIC3.16□□□□□ -1.9
RTL3Q8N8U3 AC110760.3-201ENST00000598794 467 ntBASIC3.16□□□□□ -1.9
RTL3Q8N8U3 AC121247.2-201ENST00000604776 136 ntBASIC3.16□□□□□ -1.9
RTL3Q8N8U3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.16□□□□□ -1.9
RTL3Q8N8U3 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
RTL3Q8N8U3 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.16□□□□□ -1.9
RTL3Q8N8U3 AL161629.2-201ENST00000615347 275 ntBASIC3.16□□□□□ -1.9
RTL3Q8N8U3 AC090132.2-201ENST00000615881 347 ntBASIC3.16□□□□□ -1.9
RTL3Q8N8U3 AC009268.2-201ENST00000621925 457 ntBASIC3.16□□□□□ -1.9
RTL3Q8N8U3 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.16□□□□□ -1.9
RTL3Q8N8U3 AP003399.1-201ENST00000637534 361 ntBASIC3.16□□□□□ -1.9
RTL3Q8N8U3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RTL3Q8N8U3 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
RTL3Q8N8U3 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.15□□□□□ -1.9
RTL3Q8N8U3 AC091564.4-201ENST00000533934 2194 ntBASIC3.15□□□□□ -1.9
RTL3Q8N8U3 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
RTL3Q8N8U3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.15□□□□□ -1.91
RTL3Q8N8U3 AC073325.2-201ENST00000339545 159 ntBASIC3.15□□□□□ -1.91
RTL3Q8N8U3 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RTL3Q8N8U3 RNU5E-8P-201ENST00000363502 116 ntBASIC3.15□□□□□ -1.91
RTL3Q8N8U3 U3.6-201ENST00000363622 211 ntBASIC3.15□□□□□ -1.91
RTL3Q8N8U3 RNU6-553P-201ENST00000364047 96 ntBASIC3.15□□□□□ -1.91
RTL3Q8N8U3 RNU6-289P-201ENST00000364093 107 ntBASIC3.15□□□□□ -1.91
RTL3Q8N8U3 RNA5SP387-201ENST00000364226 106 ntBASIC3.15□□□□□ -1.91
RTL3Q8N8U3 SNORA54-201ENST00000384281 123 ntBASIC3.15□□□□□ -1.91
RTL3Q8N8U3 RNA5SP293-201ENST00000410527 113 ntBASIC3.15□□□□□ -1.91
RTL3Q8N8U3 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.15□□□□□ -1.91
RTL3Q8N8U3 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.15□□□□□ -1.91
RTL3Q8N8U3 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.15□□□□□ -1.91
RTL3Q8N8U3 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.15□□□□□ -1.91
RTL3Q8N8U3 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.15□□□□□ -1.91
RTL3Q8N8U3 AC112653.1-201ENST00000443851 386 ntBASIC3.15□□□□□ -1.91
RTL3Q8N8U3 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.15□□□□□ -1.91
RTL3Q8N8U3 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.15□□□□□ -1.91
RTL3Q8N8U3 RNU7-125P-201ENST00000458760 62 ntBASIC3.15□□□□□ -1.91
RTL3Q8N8U3 AC091179.1-201ENST00000461606 579 ntBASIC3.15□□□□□ -1.91
RTL3Q8N8U3 RPL7P5-201ENST00000471472 736 ntBASIC3.15□□□□□ -1.91
RTL3Q8N8U3 RPL30P6-201ENST00000475925 342 ntBASIC3.15□□□□□ -1.91
RTL3Q8N8U3 RPF2P2-201ENST00000504693 896 ntBASIC3.15□□□□□ -1.91
RTL3Q8N8U3 OR5BM1P-201ENST00000512021 366 ntBASIC3.15□□□□□ -1.91
RTL3Q8N8U3 RNU6-1256P-201ENST00000516539 103 ntBASIC3.15□□□□□ -1.91
RTL3Q8N8U3 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.15□□□□□ -1.91
RTL3Q8N8U3 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.15□□□□□ -1.91
RTL3Q8N8U3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.15□□□□□ -1.91
RTL3Q8N8U3 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.15□□□□□ -1.91
RTL3Q8N8U3 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
RTL3Q8N8U3 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms