Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.49□□□□□ -1.69
SYNE4Q8N205 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SYNE4Q8N205 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SYNE4Q8N205 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.49□□□□□ -1.69
SYNE4Q8N205 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.49□□□□□ -1.69
SYNE4Q8N205 AC010928.3-201ENST00000587712 541 ntBASIC4.49□□□□□ -1.69
SYNE4Q8N205 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.49□□□□□ -1.69
SYNE4Q8N205 NRBF2P5-201ENST00000603087 788 ntBASIC4.49□□□□□ -1.69
SYNE4Q8N205 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.49□□□□□ -1.69
SYNE4Q8N205 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.49□□□□□ -1.69
SYNE4Q8N205 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.49□□□□□ -1.69
SYNE4Q8N205 AP006248.2-201ENST00000623309 592 ntBASIC4.49□□□□□ -1.69
SYNE4Q8N205 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
SYNE4Q8N205 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.49□□□□□ -1.69
SYNE4Q8N205 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SYNE4Q8N205 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SYNE4Q8N205 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SYNE4Q8N205 KPNA2P2-201ENST00000419546 1489 ntBASIC4.49□□□□□ -1.69
SYNE4Q8N205 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SYNE4Q8N205 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
SYNE4Q8N205 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.49□□□□□ -1.69
SYNE4Q8N205 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SYNE4Q8N205 AL645937.1-201ENST00000641739 1652 ntBASIC4.48□□□□□ -1.69
SYNE4Q8N205 SAGE2P-201ENST00000420011 2126 ntBASIC4.48□□□□□ -1.69
SYNE4Q8N205 SCN1A-220ENST00000641603 12506 ntBASIC4.48□□□□□ -1.69
SYNE4Q8N205 AL450326.2-201ENST00000421913 1962 ntBASIC4.48□□□□□ -1.69
SYNE4Q8N205 RNU5E-1-201ENST00000362477 120 ntBASIC4.48□□□□□ -1.69
SYNE4Q8N205 SNORA63-201ENST00000363450 132 ntBASIC4.48□□□□□ -1.69
SYNE4Q8N205 RNU4-1-201ENST00000363925 141 ntBASIC4.48□□□□□ -1.69
SYNE4Q8N205 RNU6-1243P-201ENST00000364028 107 ntBASIC4.48□□□□□ -1.69
SYNE4Q8N205 RNU6-767P-201ENST00000384132 107 ntBASIC4.48□□□□□ -1.69
SYNE4Q8N205 Y_RNA.460-201ENST00000384255 102 ntBASIC4.48□□□□□ -1.69
SYNE4Q8N205 RNU6-178P-201ENST00000384631 104 ntBASIC4.48□□□□□ -1.69
SYNE4Q8N205 SNORA48.5-201ENST00000391143 135 ntBASIC4.48□□□□□ -1.69
SYNE4Q8N205 HLFP1-201ENST00000402375 499 ntBASIC4.48□□□□□ -1.69
SYNE4Q8N205 MIR1289-1-201ENST00000408836 144 ntBASIC4.48□□□□□ -1.69
SYNE4Q8N205 RNU6-1068P-201ENST00000410958 103 ntBASIC4.48□□□□□ -1.69
SYNE4Q8N205 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.48□□□□□ -1.69
SYNE4Q8N205 AC073136.2-201ENST00000417282 849 ntBASIC4.48□□□□□ -1.69
SYNE4Q8N205 SNRPEP10-201ENST00000420249 274 ntBASIC4.48□□□□□ -1.69
SYNE4Q8N205 AL353678.1-201ENST00000422735 741 ntBASIC4.48□□□□□ -1.69
SYNE4Q8N205 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.48□□□□□ -1.69
SYNE4Q8N205 AC005019.1-201ENST00000436455 431 ntBASIC4.48□□□□□ -1.69
SYNE4Q8N205 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.48□□□□□ -1.69
SYNE4Q8N205 MTCYBP6-201ENST00000441810 138 ntBASIC4.48□□□□□ -1.69
SYNE4Q8N205 AC104073.1-201ENST00000451988 151 ntBASIC4.48□□□□□ -1.69
SYNE4Q8N205 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SYNE4Q8N205 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.48□□□□□ -1.69
SYNE4Q8N205 OR5B19P-201ENST00000531766 928 ntBASIC4.48□□□□□ -1.69
SYNE4Q8N205 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.48□□□□□ -1.69
SYNE4Q8N205 PDCD5P1-201ENST00000543528 309 ntBASIC4.48□□□□□ -1.69
SYNE4Q8N205 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.48□□□□□ -1.69
SYNE4Q8N205 AC123904.2-201ENST00000548059 300 ntBASIC4.48□□□□□ -1.69
SYNE4Q8N205 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.48□□□□□ -1.69
SYNE4Q8N205 LSM6P2-201ENST00000552208 177 ntBASIC4.48□□□□□ -1.69
SYNE4Q8N205 HSPE1P3-201ENST00000559254 309 ntBASIC4.48□□□□□ -1.69
SYNE4Q8N205 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.48□□□□□ -1.69
SYNE4Q8N205 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.48□□□□□ -1.69
SYNE4Q8N205 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.48□□□□□ -1.69
SYNE4Q8N205 BRDTP1-201ENST00000605735 677 ntBASIC4.48□□□□□ -1.69
SYNE4Q8N205 AL161734.1-201ENST00000609720 557 ntBASIC4.48□□□□□ -1.69
SYNE4Q8N205 AL158801.5-201ENST00000623123 465 ntBASIC4.48□□□□□ -1.69
SYNE4Q8N205 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.48□□□□□ -1.69
SYNE4Q8N205 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SYNE4Q8N205 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SYNE4Q8N205 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SYNE4Q8N205 MTND5P28-201ENST00000438005 1594 ntBASIC4.48□□□□□ -1.69
SYNE4Q8N205 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.48□□□□□ -1.69
SYNE4Q8N205 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SYNE4Q8N205 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.48□□□□□ -1.69
SYNE4Q8N205 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SYNE4Q8N205 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SYNE4Q8N205 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.47□□□□□ -1.69
SYNE4Q8N205 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
SYNE4Q8N205 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SYNE4Q8N205 Y_RNA.72-201ENST00000362894 103 ntBASIC4.47□□□□□ -1.69
SYNE4Q8N205 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SYNE4Q8N205 RNU6-1148P-201ENST00000410992 104 ntBASIC4.47□□□□□ -1.69
SYNE4Q8N205 AC078974.1-201ENST00000411597 223 ntBASIC4.47□□□□□ -1.69
SYNE4Q8N205 AC069218.2-201ENST00000411665 344 ntBASIC4.47□□□□□ -1.69
SYNE4Q8N205 AC127391.1-201ENST00000411737 98 ntBASIC4.47□□□□□ -1.69
SYNE4Q8N205 TPMTP2-201ENST00000414372 726 ntBASIC4.47□□□□□ -1.69
SYNE4Q8N205 MTCO2P5-201ENST00000422621 426 ntBASIC4.47□□□□□ -1.69
SYNE4Q8N205 AC019097.1-201ENST00000424783 735 ntBASIC4.47□□□□□ -1.69
SYNE4Q8N205 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.47□□□□□ -1.69
SYNE4Q8N205 AL606489.2-201ENST00000433886 234 ntBASIC4.47□□□□□ -1.69
SYNE4Q8N205 HMGB3P12-201ENST00000438745 556 ntBASIC4.47□□□□□ -1.69
SYNE4Q8N205 MRPL50P4-201ENST00000446432 475 ntBASIC4.47□□□□□ -1.69
SYNE4Q8N205 AC002381.1-201ENST00000447049 280 ntBASIC4.47□□□□□ -1.69
SYNE4Q8N205 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.47□□□□□ -1.69
SYNE4Q8N205 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.47□□□□□ -1.69
SYNE4Q8N205 TRBV26-201ENST00000456572 344 ntBASIC4.47□□□□□ -1.69
SYNE4Q8N205 RPL36AP51-201ENST00000487216 318 ntBASIC4.47□□□□□ -1.69
SYNE4Q8N205 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.47□□□□□ -1.69
SYNE4Q8N205 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.47□□□□□ -1.69
SYNE4Q8N205 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.47□□□□□ -1.69
SYNE4Q8N205 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.47□□□□□ -1.69
SYNE4Q8N205 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.47□□□□□ -1.69
SYNE4Q8N205 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.47□□□□□ -1.69
SYNE4Q8N205 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms