Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 MAPK10-266ENST00000641066 6555 ntBASIC2.4□□□□□ -2.03
LINC01561Q8N1V8 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
LINC01561Q8N1V8 AC092104.1-201ENST00000497346 1441 ntBASIC2.4□□□□□ -2.03
LINC01561Q8N1V8 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
LINC01561Q8N1V8 AC007823.1-201ENST00000569932 1566 ntBASIC2.4□□□□□ -2.03
LINC01561Q8N1V8 AC026241.1-201ENST00000517873 2142 ntBASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 U3.11-201ENST00000364476 212 ntBASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 AL513477.1-202ENST00000417061 214 ntBASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 GPM6BP2-201ENST00000432046 144 ntBASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 RPS15AP5-201ENST00000436276 388 ntBASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 GPM6BP1-201ENST00000446387 144 ntBASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 MTATP6P7-201ENST00000453315 681 ntBASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 RPS29P33-201ENST00000456717 146 ntBASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 AL133162.1-201ENST00000463228 453 ntBASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 RPL27AP5-201ENST00000469428 449 ntBASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 RBM43P1-201ENST00000476891 1081 ntBASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 AC005178.1-201ENST00000508392 440 ntBASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 SCARNA14-201ENST00000516903 136 ntBASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 RNU6-56P-201ENST00000516986 93 ntBASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 SNORA31.26-201ENST00000517250 137 ntBASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 PAICSP4-201ENST00000517543 1253 ntBASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 ASB8-204ENST00000536071 568 ntTSL 4 BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 AC123904.2-201ENST00000548059 300 ntBASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 AC128657.1-201ENST00000549459 145 ntBASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 ZNF321P-202ENST00000550843 495 ntBASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 AC010546.1-201ENST00000569391 485 ntBASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 MTATP6P24-201ENST00000576835 677 ntBASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 MIR3939-201ENST00000582614 106 ntBASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 AC008507.1-201ENST00000587506 734 ntBASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 AC067852.3-201ENST00000589177 561 ntBASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 AC068790.4-201ENST00000602474 263 ntBASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 AL355877.2-201ENST00000603670 358 ntBASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 AC018638.7-201ENST00000605836 1114 ntBASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 AC079248.2-201ENST00000623779 326 ntBASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 AC017037.3-201ENST00000625016 472 ntBASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 AL355480.1-201ENST00000629041 99 ntBASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
LINC01561Q8N1V8 AL049781.1-201ENST00000623195 3585 ntBASIC2.38□□□□□ -2.03
LINC01561Q8N1V8 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
LINC01561Q8N1V8 AC073073.2-201ENST00000609827 2578 ntBASIC2.38□□□□□ -2.03
LINC01561Q8N1V8 UBE2L2-201ENST00000254302 429 ntBASIC2.38□□□□□ -2.03
LINC01561Q8N1V8 MIR30E-201ENST00000362104 92 ntBASIC2.38□□□□□ -2.03
LINC01561Q8N1V8 RNU5F-6P-201ENST00000362979 116 ntBASIC2.38□□□□□ -2.03
LINC01561Q8N1V8 RNU6-778P-201ENST00000363269 103 ntBASIC2.38□□□□□ -2.03
LINC01561Q8N1V8 RNU6-511P-201ENST00000363496 107 ntBASIC2.38□□□□□ -2.03
LINC01561Q8N1V8 RN7SKP226-201ENST00000364912 300 ntBASIC2.38□□□□□ -2.03
LINC01561Q8N1V8 RNY3P13-201ENST00000365542 102 ntBASIC2.38□□□□□ -2.03
LINC01561Q8N1V8 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
LINC01561Q8N1V8 RNU6-809P-201ENST00000384461 107 ntBASIC2.38□□□□□ -2.03
LINC01561Q8N1V8 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
LINC01561Q8N1V8 AL513475.1-201ENST00000406602 315 ntBASIC2.38□□□□□ -2.03
LINC01561Q8N1V8 RN7SKP111-201ENST00000410349 271 ntBASIC2.38□□□□□ -2.03
LINC01561Q8N1V8 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.38□□□□□ -2.03
LINC01561Q8N1V8 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.38□□□□□ -2.03
LINC01561Q8N1V8 BTF3L4P3-201ENST00000418879 476 ntBASIC2.38□□□□□ -2.03
LINC01561Q8N1V8 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.38□□□□□ -2.03
LINC01561Q8N1V8 BPY2DP-201ENST00000422208 265 ntBASIC2.38□□□□□ -2.03
LINC01561Q8N1V8 GAS5-208ENST00000425771 242 ntTSL 3 BASIC2.38□□□□□ -2.03
LINC01561Q8N1V8 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.38□□□□□ -2.03
LINC01561Q8N1V8 MTND5P25-201ENST00000430499 799 ntBASIC2.38□□□□□ -2.03
LINC01561Q8N1V8 AC010153.1-201ENST00000432862 727 ntBASIC2.38□□□□□ -2.03
LINC01561Q8N1V8 RPL23AP22-201ENST00000437556 453 ntBASIC2.38□□□□□ -2.03
LINC01561Q8N1V8 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.38□□□□□ -2.03
LINC01561Q8N1V8 HSFY6P-201ENST00000445573 403 ntBASIC2.38□□□□□ -2.03
LINC01561Q8N1V8 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms