Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 MIR585-201ENST00000384887 94 ntBASIC5.84□□□□□ -1.47
SCUBE3Q8IX30 AL133270.1-201ENST00000402635 279 ntBASIC5.84□□□□□ -1.47
SCUBE3Q8IX30 RN7SKP114-201ENST00000410327 279 ntBASIC5.84□□□□□ -1.47
SCUBE3Q8IX30 RNU5E-9P-201ENST00000411164 104 ntBASIC5.84□□□□□ -1.47
SCUBE3Q8IX30 AL133482.1-201ENST00000415988 498 ntBASIC5.84□□□□□ -1.47
SCUBE3Q8IX30 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.84□□□□□ -1.47
SCUBE3Q8IX30 AL451062.2-201ENST00000427515 271 ntBASIC5.84□□□□□ -1.47
SCUBE3Q8IX30 MRPL48P1-201ENST00000445390 636 ntBASIC5.84□□□□□ -1.47
SCUBE3Q8IX30 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.84□□□□□ -1.47
SCUBE3Q8IX30 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.84□□□□□ -1.47
SCUBE3Q8IX30 RPS26P21-201ENST00000475397 348 ntBASIC5.84□□□□□ -1.47
SCUBE3Q8IX30 AC093270.2-201ENST00000486157 792 ntBASIC5.84□□□□□ -1.47
SCUBE3Q8IX30 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.84□□□□□ -1.47
SCUBE3Q8IX30 RPS27P26-201ENST00000494583 239 ntBASIC5.84□□□□□ -1.47
SCUBE3Q8IX30 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.84□□□□□ -1.47
SCUBE3Q8IX30 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC5.84□□□□□ -1.47
SCUBE3Q8IX30 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.84□□□□□ -1.47
SCUBE3Q8IX30 AC136777.2-201ENST00000522979 358 ntBASIC5.84□□□□□ -1.47
SCUBE3Q8IX30 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.84□□□□□ -1.47
SCUBE3Q8IX30 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC5.84□□□□□ -1.47
SCUBE3Q8IX30 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.84□□□□□ -1.47
SCUBE3Q8IX30 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.84□□□□□ -1.47
SCUBE3Q8IX30 MIR1273C-201ENST00000578669 77 ntBASIC5.84□□□□□ -1.47
SCUBE3Q8IX30 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.84□□□□□ -1.47
SCUBE3Q8IX30 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SCUBE3Q8IX30 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SCUBE3Q8IX30 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.84□□□□□ -1.47
SCUBE3Q8IX30 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
SCUBE3Q8IX30 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SCUBE3Q8IX30 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
SCUBE3Q8IX30 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.84□□□□□ -1.47
SCUBE3Q8IX30 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
SCUBE3Q8IX30 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SCUBE3Q8IX30 BCORP1-203ENST00000513194 5093 ntBASIC5.84□□□□□ -1.48
SCUBE3Q8IX30 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
SCUBE3Q8IX30 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 AC114774.1-201ENST00000507410 1770 ntBASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 RNU6-1289P-201ENST00000384431 106 ntBASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 MIR551A-201ENST00000385042 96 ntBASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 RNU5A-5P-201ENST00000411054 116 ntBASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 AC016712.1-201ENST00000431088 378 ntBASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 AC005002.2-201ENST00000438228 269 ntBASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 TPT1P12-201ENST00000448968 492 ntBASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 AC007395.1-201ENST00000451333 677 ntBASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 SSXP4-201ENST00000451349 245 ntBASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 RN7SL583P-201ENST00000475692 287 ntBASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 RN7SL826P-201ENST00000479724 288 ntBASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 AP001025.1-201ENST00000486139 332 ntBASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 SUMO2P6-201ENST00000505273 288 ntBASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 SNORA27.4-201ENST00000516650 95 ntBASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 RNU6-840P-201ENST00000517275 65 ntBASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 AC103996.1-201ENST00000555468 102 ntBASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 MIR1269B-201ENST00000580405 75 ntBASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 AL049539.1-201ENST00000611964 459 ntBASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 AC132068.1-201ENST00000623805 459 ntBASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 Z99571.1-201ENST00000636677 394 ntBASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SCUBE3Q8IX30 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.82□□□□□ -1.48
SCUBE3Q8IX30 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SCUBE3Q8IX30 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SCUBE3Q8IX30 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SCUBE3Q8IX30 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SCUBE3Q8IX30 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.82□□□□□ -1.48
SCUBE3Q8IX30 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SCUBE3Q8IX30 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SCUBE3Q8IX30 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SCUBE3Q8IX30 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
SCUBE3Q8IX30 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SCUBE3Q8IX30 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SCUBE3Q8IX30 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
SCUBE3Q8IX30 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SCUBE3Q8IX30 Y_RNA.215-201ENST00000364204 112 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms