Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NPAS4Q8IUM7 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 MAPK10-328ENST00000641553 4009 ntBASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 RNU6-45P-201ENST00000384471 107 ntBASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 U3.22-201ENST00000391120 215 ntBASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 SNORA11-201ENST00000408789 128 ntBASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 RNU6-370P-201ENST00000411008 104 ntBASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 RPL7AP61-201ENST00000443410 636 ntBASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 AL162591.2-201ENST00000449634 317 ntBASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 HMGB3P22-202ENST00000451823 572 ntBASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 RPL21P41-201ENST00000459863 264 ntBASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 MTATP8P1-201ENST00000467115 207 ntBASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 APOOP4-201ENST00000513530 597 ntBASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 RN7SKP122-201ENST00000515923 296 ntBASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 AC069113.1-201ENST00000517763 267 ntBASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 RGS4-209ENST00000531057 544 ntTSL 4 BASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 MIR548AC-201ENST00000585049 88 ntBASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 AC023043.2-201ENST00000589678 1026 ntBASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 RMST_9.1-201ENST00000619945 193 ntBASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 AL512643.1-201ENST00000635735 524 ntBASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
NPAS4Q8IUM7 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 HSPA8P4-201ENST00000511877 1920 ntBASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 OR56B2P-202ENST00000641377 2453 ntBASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 RPL21P109-201ENST00000422213 475 ntBASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 AL645608.4-201ENST00000423619 154 ntBASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 RSL24D1P6-201ENST00000426934 401 ntBASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 AL669831.1-202ENST00000428504 417 ntBASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 ENPP7P11-201ENST00000505915 627 ntBASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 AC091868.1-201ENST00000508746 304 ntBASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 MTCO2P24-201ENST00000515611 426 ntBASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 RNU6-1088P-201ENST00000516850 104 ntBASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 AC008269.2-201ENST00000561915 1105 ntBASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 AC138761.3-201ENST00000579993 334 ntBASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 SNORA74C-1-201ENST00000580726 201 ntBASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 CYP2C61P-201ENST00000604072 290 ntBASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 AC116096.1-201ENST00000566804 2314 ntBASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
NPAS4Q8IUM7 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 A2MP1-204ENST00000566278 4130 ntBASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 RNU6-1167P-201ENST00000363227 94 ntBASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 RNA5SP447-201ENST00000363749 119 ntBASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 MDM4-202ENST00000367180 547 ntTSL 3 BASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 RPS4XP7-201ENST00000406274 780 ntBASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 MIR548K-201ENST00000408406 116 ntBASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 AL451062.2-201ENST00000427515 271 ntBASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 RPS17P8-201ENST00000434525 335 ntBASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 Z98949.2-201ENST00000440996 144 ntBASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 AL731563.1-201ENST00000442202 214 ntBASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 RN7SL517P-201ENST00000462240 305 ntBASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 AC025164.1-201ENST00000496249 478 ntBASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 RN7SL558P-201ENST00000497468 299 ntBASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
NPAS4Q8IUM7 AC005921.1-201ENST00000510589 286 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms