Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 MIR550A3-201ENST00000390735 95 ntBASIC4.54□□□□□ -1.68
ATG4DQ86TL0 RNU6-516P-201ENST00000411381 104 ntBASIC4.54□□□□□ -1.68
ATG4DQ86TL0 AC234781.4-201ENST00000419384 244 ntBASIC4.54□□□□□ -1.68
ATG4DQ86TL0 RPS12P5-201ENST00000423449 371 ntBASIC4.54□□□□□ -1.68
ATG4DQ86TL0 RPS27P18-201ENST00000431701 247 ntBASIC4.54□□□□□ -1.68
ATG4DQ86TL0 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.54□□□□□ -1.68
ATG4DQ86TL0 RPL34P20-201ENST00000442771 351 ntBASIC4.54□□□□□ -1.68
ATG4DQ86TL0 CEACAMP7-201ENST00000444105 496 ntBASIC4.54□□□□□ -1.68
ATG4DQ86TL0 RPL29P29-201ENST00000448725 423 ntBASIC4.54□□□□□ -1.68
ATG4DQ86TL0 RPS17P13-201ENST00000448974 407 ntBASIC4.54□□□□□ -1.68
ATG4DQ86TL0 RN7SL432P-201ENST00000484057 298 ntBASIC4.54□□□□□ -1.68
ATG4DQ86TL0 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.54□□□□□ -1.68
ATG4DQ86TL0 COX7A2P2-201ENST00000505291 250 ntBASIC4.54□□□□□ -1.68
ATG4DQ86TL0 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.54□□□□□ -1.68
ATG4DQ86TL0 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ATG4DQ86TL0 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATG4DQ86TL0 AL671862.1-201ENST00000515851 349 ntBASIC4.54□□□□□ -1.68
ATG4DQ86TL0 Y_RNA.687-201ENST00000516558 91 ntBASIC4.54□□□□□ -1.68
ATG4DQ86TL0 AC144568.1-201ENST00000520139 137 ntBASIC4.54□□□□□ -1.68
ATG4DQ86TL0 AP006587.4-201ENST00000526053 529 ntBASIC4.54□□□□□ -1.68
ATG4DQ86TL0 AC024405.2-202ENST00000532731 184 ntBASIC4.54□□□□□ -1.68
ATG4DQ86TL0 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.54□□□□□ -1.68
ATG4DQ86TL0 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.54□□□□□ -1.68
ATG4DQ86TL0 RN7SL802P-201ENST00000577858 299 ntBASIC4.54□□□□□ -1.68
ATG4DQ86TL0 MZT1P2-201ENST00000604387 248 ntBASIC4.54□□□□□ -1.68
ATG4DQ86TL0 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.54□□□□□ -1.68
ATG4DQ86TL0 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.54□□□□□ -1.68
ATG4DQ86TL0 AL591926.8-201ENST00000616876 211 ntBASIC4.54□□□□□ -1.68
ATG4DQ86TL0 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.54□□□□□ -1.68
ATG4DQ86TL0 AC005183.1-201ENST00000603687 1979 ntBASIC4.54□□□□□ -1.68
ATG4DQ86TL0 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATG4DQ86TL0 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.54□□□□□ -1.68
ATG4DQ86TL0 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
ATG4DQ86TL0 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ATG4DQ86TL0 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.54□□□□□ -1.68
ATG4DQ86TL0 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ATG4DQ86TL0 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
ATG4DQ86TL0 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
ATG4DQ86TL0 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ATG4DQ86TL0 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
ATG4DQ86TL0 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ATG4DQ86TL0 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.53□□□□□ -1.68
ATG4DQ86TL0 STX3-208ENST00000641815 3236 ntBASIC4.53□□□□□ -1.68
ATG4DQ86TL0 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ATG4DQ86TL0 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.53□□□□□ -1.68
ATG4DQ86TL0 AC005005.4-201ENST00000623789 16698 ntBASIC4.53□□□□□ -1.68
ATG4DQ86TL0 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ATG4DQ86TL0 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
ATG4DQ86TL0 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
ATG4DQ86TL0 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ATG4DQ86TL0 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.53□□□□□ -1.68
ATG4DQ86TL0 RNA5SP123-201ENST00000363244 119 ntBASIC4.53□□□□□ -1.68
ATG4DQ86TL0 Y_RNA.199-201ENST00000364014 102 ntBASIC4.53□□□□□ -1.68
ATG4DQ86TL0 RNU6-1329P-201ENST00000365664 107 ntBASIC4.53□□□□□ -1.68
ATG4DQ86TL0 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ATG4DQ86TL0 AL358176.3-201ENST00000420757 454 ntBASIC4.53□□□□□ -1.68
ATG4DQ86TL0 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.53□□□□□ -1.68
ATG4DQ86TL0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.53□□□□□ -1.68
ATG4DQ86TL0 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.53□□□□□ -1.68
ATG4DQ86TL0 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.53□□□□□ -1.68
ATG4DQ86TL0 COX6B1P5-201ENST00000509843 249 ntBASIC4.53□□□□□ -1.68
ATG4DQ86TL0 SNORA31.6-201ENST00000516241 130 ntBASIC4.53□□□□□ -1.68
ATG4DQ86TL0 RNA5SP43-201ENST00000516559 110 ntBASIC4.53□□□□□ -1.68
ATG4DQ86TL0 RNU6-861P-201ENST00000516745 106 ntBASIC4.53□□□□□ -1.68
ATG4DQ86TL0 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.53□□□□□ -1.68
ATG4DQ86TL0 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ATG4DQ86TL0 MIR4643-201ENST00000577473 78 ntBASIC4.53□□□□□ -1.68
ATG4DQ86TL0 MIR4273-201ENST00000582824 84 ntBASIC4.53□□□□□ -1.68
ATG4DQ86TL0 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.53□□□□□ -1.68
ATG4DQ86TL0 AC093799.2-201ENST00000610062 578 ntBASIC4.53□□□□□ -1.68
ATG4DQ86TL0 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ATG4DQ86TL0 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.53□□□□□ -1.68
ATG4DQ86TL0 AC015914.2-201ENST00000618167 288 ntBASIC4.53□□□□□ -1.68
ATG4DQ86TL0 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.53□□□□□ -1.68
ATG4DQ86TL0 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ATG4DQ86TL0 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.53□□□□□ -1.68
ATG4DQ86TL0 AC011978.2-201ENST00000569835 2054 ntBASIC4.53□□□□□ -1.68
ATG4DQ86TL0 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.53□□□□□ -1.68
ATG4DQ86TL0 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ATG4DQ86TL0 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
ATG4DQ86TL0 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.53□□□□□ -1.69
ATG4DQ86TL0 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.52□□□□□ -1.69
ATG4DQ86TL0 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.52□□□□□ -1.69
ATG4DQ86TL0 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.52□□□□□ -1.69
ATG4DQ86TL0 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATG4DQ86TL0 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ATG4DQ86TL0 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.52□□□□□ -1.69
ATG4DQ86TL0 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.52□□□□□ -1.69
ATG4DQ86TL0 Y_RNA.16-201ENST00000362421 102 ntBASIC4.52□□□□□ -1.69
ATG4DQ86TL0 RNA5SP455-201ENST00000365190 119 ntBASIC4.52□□□□□ -1.69
ATG4DQ86TL0 RNU6-790P-201ENST00000384479 105 ntBASIC4.52□□□□□ -1.69
ATG4DQ86TL0 MIR628-201ENST00000385229 95 ntBASIC4.52□□□□□ -1.69
ATG4DQ86TL0 RNU2-20P-201ENST00000410425 191 ntBASIC4.52□□□□□ -1.69
ATG4DQ86TL0 EIF4EP2-201ENST00000422816 654 ntBASIC4.52□□□□□ -1.69
ATG4DQ86TL0 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.52□□□□□ -1.69
ATG4DQ86TL0 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ATG4DQ86TL0 AC127537.2-201ENST00000439258 465 ntBASIC4.52□□□□□ -1.69
ATG4DQ86TL0 AC010733.1-201ENST00000451515 401 ntBASIC4.52□□□□□ -1.69
ATG4DQ86TL0 AL136097.1-201ENST00000456945 913 ntBASIC4.52□□□□□ -1.69
ATG4DQ86TL0 RN7SL97P-201ENST00000486780 299 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms