Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 AC105137.1-201ENST00000484355 562 ntBASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 AC091167.1-201ENST00000492017 396 ntBASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 MRPL49P2-201ENST00000521066 465 ntBASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 AL121576.1-201ENST00000556055 276 ntBASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 AL118558.2-201ENST00000556294 238 ntBASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 MIR4458-201ENST00000578872 75 ntBASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 IPO5P1-202ENST00000600039 287 ntBASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 VN1R85P-201ENST00000601587 426 ntBASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 RNA5SP108-201ENST00000605921 117 ntBASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 AC103710.3-201ENST00000608157 948 ntBASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 AL133215.3-201ENST00000609801 448 ntBASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 AC099669.2-201ENST00000616549 437 ntBASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 AC007546.1-201ENST00000619452 559 ntBASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.94□□□□□ -1.62
RUFY4Q6ZNE9 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 AC027290.2-201ENST00000623210 18662 ntBASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 MIR331-201ENST00000362302 94 ntBASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 Y_RNA.162-201ENST00000363683 102 ntBASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 Y_RNA.212-201ENST00000364177 102 ntBASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 RNU1-132P-201ENST00000364300 164 ntBASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 SNORA23-201ENST00000365128 182 ntBASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 Y_RNA.378-201ENST00000365652 113 ntBASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 SMIM11P1-201ENST00000369586 178 ntBASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 RPL30P2-201ENST00000414021 291 ntBASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 PRPS1P1-201ENST00000445305 876 ntBASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 RPL21P129-201ENST00000491732 478 ntBASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 CCDC34P1-201ENST00000507441 517 ntBASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 SNORA25.17-201ENST00000517184 124 ntBASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 MYL12AP1-201ENST00000518490 515 ntBASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 AP001804.3-201ENST00000525146 880 ntBASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 AP000889.2-201ENST00000532684 490 ntBASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 OR11H5P-201ENST00000554039 926 ntBASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 AC008521.1-201ENST00000587471 187 ntBASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 AC006116.10-201ENST00000591836 581 ntBASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 AL450472.3-201ENST00000615578 367 ntBASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 AL023881.1-201ENST00000621088 301 ntBASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RUFY4Q6ZNE9 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 LARP1BP1-201ENST00000506036 1359 ntBASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 RNA5SP366-201ENST00000365454 123 ntBASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 MIR23B-201ENST00000384832 97 ntBASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 EIF4E2P1-201ENST00000393781 255 ntBASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 POLHP1-201ENST00000411806 470 ntBASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 RPS23P10-201ENST00000416185 486 ntBASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 PPP1R11P2-201ENST00000423543 382 ntBASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 AC012671.1-201ENST00000451912 203 ntBASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 Y_RNA.635-201ENST00000459041 101 ntBASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 AC004801.2-202ENST00000463559 283 ntBASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 RPS26P28-201ENST00000470806 348 ntBASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 UQCRHP4-201ENST00000471686 272 ntBASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 AC012158.1-204ENST00000483430 465 ntBASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 RNU6-1170P-201ENST00000515974 106 ntBASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 AP003072.1-201ENST00000531740 145 ntBASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 AL138889.2-201ENST00000603883 242 ntBASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 SNX18P1Y-201ENST00000616231 511 ntBASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 ZYXP1-201ENST00000617638 118 ntBASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 AC034229.5-201ENST00000624258 185 ntBASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 MIR3653-201ENST00000625572 110 ntBASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.92□□□□□ -1.62
RUFY4Q6ZNE9 AL133216.2-202ENST00000634512 349 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 182.3 ms