Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AC090578.1-201ENST00000604955 591 ntBASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 AC108747.1-201ENST00000609508 535 ntBASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 AC019176.2-201ENST00000611579 315 ntBASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 AL589743.7-201ENST00000612637 233 ntBASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 AL359740.1-201ENST00000624340 592 ntBASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 AC004925.1-201ENST00000624256 2706 ntBASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SYNE3Q6ZMZ3 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 RNA5SP119-201ENST00000362715 117 ntBASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 RNU4-1-201ENST00000363925 141 ntBASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 AP002088.1-201ENST00000382740 395 ntBASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 Y_RNA.505-201ENST00000384489 102 ntBASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 MIR7-3-201ENST00000384898 110 ntBASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 MIR670-201ENST00000390142 98 ntBASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 RNU6-754P-201ENST00000391166 107 ntBASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 AP000567.1-201ENST00000406413 156 ntBASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 MTCO3P41-201ENST00000414801 328 ntBASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 MTCO3P12-201ENST00000416718 547 ntBASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 RPL31P12-201ENST00000422587 358 ntBASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 USP9YP14-201ENST00000430663 563 ntBASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 BX679664.1-201ENST00000434429 253 ntBASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 AC005019.1-201ENST00000436455 431 ntBASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 RPL22P17-201ENST00000438729 315 ntBASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 RPL17P49-201ENST00000443728 411 ntBASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 TPT1P14-201ENST00000448018 505 ntBASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 MTND1P27-201ENST00000451117 902 ntBASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 RPS4XP2-201ENST00000458402 793 ntBASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 AC021205.2-201ENST00000480069 347 ntBASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 AC093331.1-201ENST00000521474 169 ntBASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 NCAPGP2-201ENST00000557911 754 ntBASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 MIR4276-201ENST00000584832 70 ntBASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 AC087241.4-201ENST00000612441 480 ntBASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 AC007496.3-201ENST00000624987 3443 ntBASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 AL672296.1-201ENST00000427780 2158 ntBASIC3.92□□□□□ -1.78
SYNE3Q6ZMZ3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 AL356274.2-201ENST00000624379 3752 ntBASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 RNU1-75P-201ENST00000347264 129 ntBASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 SNORA71.3-201ENST00000362582 128 ntBASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 MIR490-201ENST00000384865 128 ntBASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 RNU6-882P-201ENST00000391025 103 ntBASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 BX323014.1-201ENST00000412876 237 ntBASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 AC093578.1-201ENST00000415219 368 ntBASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 NEK4P1-201ENST00000433383 879 ntBASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 TXNP1-201ENST00000441872 371 ntBASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 AC244505.5-201ENST00000443639 207 ntBASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 RAC1P7-201ENST00000445367 377 ntBASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 MTND1P12-201ENST00000455231 147 ntBASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 AC093663.1-201ENST00000497190 394 ntBASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 AC010265.1-201ENST00000513509 211 ntBASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 AP000907.2-201ENST00000530827 353 ntBASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 CCNG2P1-201ENST00000549521 1000 ntBASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 OR4K8P-201ENST00000578842 1048 ntBASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 CKS1BP3-201ENST00000600888 237 ntBASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 Z83843.1-201ENST00000604070 3685 ntBASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 AL162713.1-201ENST00000604480 262 ntBASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 AL158211.4-201ENST00000606988 584 ntBASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 AL391813.2-201ENST00000609113 322 ntBASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 uc_338.1-201ENST00000612113 180 ntBASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 AC138932.5-201ENST00000617759 563 ntBASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 SNORD39.4-201ENST00000620099 78 ntBASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 SNORA50A-202ENST00000629536 136 ntBASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 FARSBP1-201ENST00000435808 1778 ntBASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.91□□□□□ -1.78
SYNE3Q6ZMZ3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.78
SYNE3Q6ZMZ3 AL049781.1-201ENST00000623195 3585 ntBASIC3.9□□□□□ -1.78
SYNE3Q6ZMZ3 U8.3-201ENST00000363321 132 ntBASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 RNU5A-8P-201ENST00000364102 114 ntBASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 MIR607-201ENST00000385241 96 ntBASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 FCF1P10-201ENST00000407590 479 ntBASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 RNU2-43P-201ENST00000410306 190 ntBASIC3.9□□□□□ -1.79
SYNE3Q6ZMZ3 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms