Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 NACAP2-201ENST00000318548 624 ntBASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 RNU5E-1-201ENST00000362477 120 ntBASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 SNORA62.2-201ENST00000364672 152 ntBASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 Y_RNA.387-201ENST00000383918 102 ntBASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 MIR218-2-201ENST00000385006 110 ntBASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 RNU4-14P-201ENST00000410858 122 ntBASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 RNU6-373P-201ENST00000411247 98 ntBASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 AL645937.1-202ENST00000421799 937 ntBASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 CACYBPP1-201ENST00000438592 684 ntBASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 AC239809.1-201ENST00000450470 217 ntBASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 AL583843.1-201ENST00000456070 346 ntBASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 EIF4EP3-201ENST00000498782 656 ntBASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 SUB1P1-201ENST00000524415 382 ntBASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 AC135001.1-201ENST00000544546 283 ntBASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 AC008083.2-201ENST00000546707 476 ntBASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 AC006270.2-201ENST00000578523 652 ntBASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 AC110741.2-201ENST00000605278 268 ntBASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 AC243773.3-201ENST00000613270 256 ntBASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 AC084781.2-201ENST00000615568 161 ntBASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 AC004825.2-201ENST00000616634 455 ntBASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 AC018926.3-201ENST00000618841 406 ntBASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 AL356585.4-201ENST00000623078 1229 ntBASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SYCE2Q6PIF2 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
SYCE2Q6PIF2 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
SYCE2Q6PIF2 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SYCE2Q6PIF2 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.09□□□□□ -1.76
SYCE2Q6PIF2 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 RNU4-20P-201ENST00000365601 151 ntBASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 RIOK3P1-201ENST00000418778 1528 ntBASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 ELOCP4-201ENST00000420090 333 ntBASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 AC019097.1-201ENST00000424783 735 ntBASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 RPL23AP30-201ENST00000432419 501 ntBASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 MTND5P22-201ENST00000458380 195 ntBASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 RNU6-329P-201ENST00000459618 107 ntBASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 RPL23AP71-201ENST00000470966 469 ntBASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 RNU6-1170P-201ENST00000515974 106 ntBASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 RNU6-123P-201ENST00000516163 102 ntBASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 Vault.3-201ENST00000516676 95 ntBASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 RNU6-1003P-201ENST00000517099 105 ntBASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 RNU6-1314P-201ENST00000517139 104 ntBASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 RN7SKP256-201ENST00000517201 314 ntBASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 DEFB109D-201ENST00000529497 240 ntBASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 PTP4A1P6-201ENST00000531034 478 ntBASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 AL360157.1-201ENST00000565962 87 ntBASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 AC093519.1-201ENST00000566109 298 ntBASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 MIR3167-201ENST00000579623 85 ntBASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 MIR5187-201ENST00000583479 76 ntBASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 AL512605.2-201ENST00000592972 256 ntBASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 AL391813.2-201ENST00000609113 322 ntBASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 AL359757.2-201ENST00000624309 274 ntBASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.08□□□□□ -1.76
SYCE2Q6PIF2 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
SYCE2Q6PIF2 PRO1804-201ENST00000623780 2050 ntBASIC4.07□□□□□ -1.76
SYCE2Q6PIF2 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.07□□□□□ -1.76
SYCE2Q6PIF2 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SYCE2Q6PIF2 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SYCE2Q6PIF2 MTND4P1-201ENST00000457501 1466 ntBASIC4.07□□□□□ -1.76
SYCE2Q6PIF2 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms