Protein–RNA interactions for Protein: Q5VTD9

GFI1B, Zinc finger protein Gfi-1b, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1BQ5VTD9 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
GFI1BQ5VTD9 DPPA3P3-201ENST00000603842 430 ntBASIC3.13□□□□□ -1.91
GFI1BQ5VTD9 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.13□□□□□ -1.91
GFI1BQ5VTD9 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.13□□□□□ -1.91
GFI1BQ5VTD9 AL445363.3-201ENST00000623080 671 ntBASIC3.13□□□□□ -1.91
GFI1BQ5VTD9 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
GFI1BQ5VTD9 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
GFI1BQ5VTD9 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.13□□□□□ -1.91
GFI1BQ5VTD9 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
GFI1BQ5VTD9 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 IPO8P1-201ENST00000455509 3109 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 RNU6-1309P-201ENST00000363305 108 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 Y_RNA.301-201ENST00000364990 103 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 Y_RNA.339-201ENST00000365325 102 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 SNORA51.6-201ENST00000384151 125 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 RNU6-505P-201ENST00000384427 107 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 RNU6-328P-201ENST00000390887 106 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 RPL7P60-201ENST00000397636 735 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AL356967.1-201ENST00000406305 431 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AL451054.2-201ENST00000420896 202 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AC012065.2-201ENST00000421295 375 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 HSPE1P1-201ENST00000421494 318 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AC108059.2-201ENST00000434626 151 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AC236972.2-201ENST00000434979 310 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 RPL32P28-201ENST00000443577 397 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 RPL23AP81-201ENST00000455252 467 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 MTCO3P2-201ENST00000457365 171 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 RNU7-66P-201ENST00000459469 62 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AC006512.1-201ENST00000468816 291 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 RPS29P19-201ENST00000479709 171 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AC005912.1-201ENST00000495392 255 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 HMGB3P15-201ENST00000507326 574 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 NPM1P41-201ENST00000512920 831 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 FTH1P9-201ENST00000513251 355 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 RNU6-559P-201ENST00000516151 98 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 RPL7P20-201ENST00000520308 745 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AP005435.4-201ENST00000529514 284 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 OR4T1P-201ENST00000554933 911 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AL118558.2-201ENST00000556294 238 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 MIR5186-201ENST00000577504 120 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AC100830.2-201ENST00000581636 240 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 MIR4503-201ENST00000582187 83 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AC098848.2-201ENST00000588023 330 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AC123786.2-201ENST00000603459 275 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AL670379.11-201ENST00000604059 253 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AL670379.10-201ENST00000604330 253 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AL670379.12-201ENST00000605291 253 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AC080078.3-201ENST00000605407 463 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AL670379.9-201ENST00000605428 253 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AL121992.2-201ENST00000606262 256 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AC019193.3-201ENST00000609144 554 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AC090425.1-201ENST00000610007 140 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AL132822.1-201ENST00000617063 513 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 7SK.10-201ENST00000621414 298 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AC007792.1-201ENST00000623023 402 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AC008013.2-202ENST00000637965 364 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 EIF2AP4-201ENST00000424793 1781 ntBASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
GFI1BQ5VTD9 AC114546.3-201ENST00000623582 1734 ntBASIC3.11□□□□□ -1.91
GFI1BQ5VTD9 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
GFI1BQ5VTD9 MTCO1P12-201ENST00000414273 1543 ntBASIC3.11□□□□□ -1.91
GFI1BQ5VTD9 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
GFI1BQ5VTD9 Y_RNA.167-201ENST00000363735 109 ntBASIC3.11□□□□□ -1.91
GFI1BQ5VTD9 Y_RNA.395-201ENST00000383945 109 ntBASIC3.11□□□□□ -1.91
GFI1BQ5VTD9 RNU6-38P-201ENST00000384085 107 ntBASIC3.11□□□□□ -1.91
GFI1BQ5VTD9 Y_RNA.445-201ENST00000384168 102 ntBASIC3.11□□□□□ -1.91
GFI1BQ5VTD9 RNU6-441P-201ENST00000384545 106 ntBASIC3.11□□□□□ -1.91
GFI1BQ5VTD9 RNU6-331P-201ENST00000384724 107 ntBASIC3.11□□□□□ -1.91
GFI1BQ5VTD9 MIR192-201ENST00000384915 110 ntBASIC3.11□□□□□ -1.91
GFI1BQ5VTD9 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
GFI1BQ5VTD9 RNY4P36-201ENST00000391116 96 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms