Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AP001317.1-201ENST00000531194 960 ntBASIC1.67□□□□□ -2.14
CCDC58Q4VC31 AC022880.1-201ENST00000534017 973 ntBASIC1.67□□□□□ -2.14
CCDC58Q4VC31 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC1.67□□□□□ -2.14
CCDC58Q4VC31 AC007375.1-201ENST00000554513 578 ntBASIC1.67□□□□□ -2.14
CCDC58Q4VC31 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.67□□□□□ -2.14
CCDC58Q4VC31 AC024614.2-201ENST00000577584 372 ntBASIC1.67□□□□□ -2.14
CCDC58Q4VC31 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC1.67□□□□□ -2.14
CCDC58Q4VC31 AC090312.2-201ENST00000582687 378 ntBASIC1.67□□□□□ -2.14
CCDC58Q4VC31 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.67□□□□□ -2.14
CCDC58Q4VC31 AC010872.1-201ENST00000624225 675 ntBASIC1.67□□□□□ -2.14
CCDC58Q4VC31 SNORA16.1-201ENST00000364597 132 ntBASIC1.66□□□□□ -2.14
CCDC58Q4VC31 RNU6-1035P-201ENST00000384477 107 ntBASIC1.66□□□□□ -2.14
CCDC58Q4VC31 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.66□□□□□ -2.14
CCDC58Q4VC31 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.66□□□□□ -2.14
CCDC58Q4VC31 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
CCDC58Q4VC31 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC58Q4VC31 AC096745.1-201ENST00000509945 370 ntBASIC1.66□□□□□ -2.14
CCDC58Q4VC31 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC58Q4VC31 AC107393.1-201ENST00000512403 346 ntBASIC1.66□□□□□ -2.14
CCDC58Q4VC31 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC58Q4VC31 AP005639.2-201ENST00000527592 928 ntBASIC1.66□□□□□ -2.14
CCDC58Q4VC31 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.66□□□□□ -2.14
CCDC58Q4VC31 OR5AL2P-201ENST00000532185 920 ntBASIC1.66□□□□□ -2.14
CCDC58Q4VC31 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CCDC58Q4VC31 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.66□□□□□ -2.14
CCDC58Q4VC31 AC017100.2-201ENST00000584628 355 ntBASIC1.66□□□□□ -2.14
CCDC58Q4VC31 BNIP3P33-201ENST00000598912 569 ntBASIC1.66□□□□□ -2.14
CCDC58Q4VC31 KATNBL1P1-201ENST00000605192 748 ntBASIC1.66□□□□□ -2.14
CCDC58Q4VC31 AP005212.4-201ENST00000614206 710 ntBASIC1.66□□□□□ -2.14
CCDC58Q4VC31 YWHAEP7-203ENST00000622054 312 ntBASIC1.66□□□□□ -2.14
CCDC58Q4VC31 AC073592.7-201ENST00000623659 507 ntBASIC1.66□□□□□ -2.14
CCDC58Q4VC31 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.66□□□□□ -2.14
CCDC58Q4VC31 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC1.66□□□□□ -2.14
CCDC58Q4VC31 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.66□□□□□ -2.14
CCDC58Q4VC31 MKKS-204ENST00000639674 192 ntBASIC1.66□□□□□ -2.14
CCDC58Q4VC31 AC092881.1-201ENST00000638218 2733 ntBASIC1.66□□□□□ -2.14
CCDC58Q4VC31 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
CCDC58Q4VC31 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.66□□□□□ -2.14
CCDC58Q4VC31 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CCDC58Q4VC31 AC046144.1-201ENST00000478559 1853 ntBASIC1.65□□□□□ -2.14
CCDC58Q4VC31 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.65□□□□□ -2.15
CCDC58Q4VC31 RNA5SP387-201ENST00000364226 106 ntBASIC1.65□□□□□ -2.15
CCDC58Q4VC31 RNU6-730P-201ENST00000383954 104 ntBASIC1.65□□□□□ -2.15
CCDC58Q4VC31 RNU1-148P-201ENST00000384472 162 ntBASIC1.65□□□□□ -2.15
CCDC58Q4VC31 U3.26-201ENST00000391236 204 ntBASIC1.65□□□□□ -2.15
CCDC58Q4VC31 AL450338.1-201ENST00000407987 512 ntBASIC1.65□□□□□ -2.15
CCDC58Q4VC31 RNU4-74P-201ENST00000411280 161 ntBASIC1.65□□□□□ -2.15
CCDC58Q4VC31 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.65□□□□□ -2.15
CCDC58Q4VC31 AL009174.1-201ENST00000426577 416 ntBASIC1.65□□□□□ -2.15
CCDC58Q4VC31 AC016691.1-201ENST00000441321 413 ntBASIC1.65□□□□□ -2.15
CCDC58Q4VC31 RPL23AP6-201ENST00000446637 472 ntBASIC1.65□□□□□ -2.15
CCDC58Q4VC31 RPL21P134-201ENST00000453468 483 ntBASIC1.65□□□□□ -2.15
CCDC58Q4VC31 RPL23AP3-201ENST00000453844 468 ntBASIC1.65□□□□□ -2.15
CCDC58Q4VC31 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC1.65□□□□□ -2.15
CCDC58Q4VC31 AC107032.1-201ENST00000485945 480 ntBASIC1.65□□□□□ -2.15
CCDC58Q4VC31 AC055855.1-201ENST00000489563 579 ntBASIC1.65□□□□□ -2.15
CCDC58Q4VC31 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC58Q4VC31 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC58Q4VC31 CBX3P4-201ENST00000538909 354 ntBASIC1.65□□□□□ -2.15
CCDC58Q4VC31 MIR1273D-201ENST00000577266 86 ntBASIC1.65□□□□□ -2.15
CCDC58Q4VC31 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.65□□□□□ -2.15
CCDC58Q4VC31 AC126118.1-201ENST00000607744 628 ntBASIC1.65□□□□□ -2.15
CCDC58Q4VC31 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
CCDC58Q4VC31 AL162233.1-201ENST00000620014 944 ntBASIC1.65□□□□□ -2.15
CCDC58Q4VC31 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.65□□□□□ -2.15
CCDC58Q4VC31 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
CCDC58Q4VC31 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
CCDC58Q4VC31 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
CCDC58Q4VC31 AC111188.2-201ENST00000529697 1387 ntBASIC1.64□□□□□ -2.15
CCDC58Q4VC31 RNA5SP276-201ENST00000362580 94 ntBASIC1.64□□□□□ -2.15
CCDC58Q4VC31 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.64□□□□□ -2.15
CCDC58Q4VC31 AL023284.1-201ENST00000403956 276 ntBASIC1.64□□□□□ -2.15
CCDC58Q4VC31 RN7SKP158-201ENST00000410453 326 ntBASIC1.64□□□□□ -2.15
CCDC58Q4VC31 RPS7P9-201ENST00000414704 586 ntBASIC1.64□□□□□ -2.15
CCDC58Q4VC31 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.64□□□□□ -2.15
CCDC58Q4VC31 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.64□□□□□ -2.15
CCDC58Q4VC31 AC006946.1-201ENST00000429106 328 ntBASIC1.64□□□□□ -2.15
CCDC58Q4VC31 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.64□□□□□ -2.15
CCDC58Q4VC31 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.64□□□□□ -2.15
CCDC58Q4VC31 HSPE1P21-201ENST00000438283 308 ntBASIC1.64□□□□□ -2.15
CCDC58Q4VC31 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.64□□□□□ -2.15
CCDC58Q4VC31 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.64□□□□□ -2.15
CCDC58Q4VC31 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.64□□□□□ -2.15
CCDC58Q4VC31 snoU109.1-201ENST00000459339 135 ntBASIC1.64□□□□□ -2.15
CCDC58Q4VC31 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
CCDC58Q4VC31 AC025181.1-201ENST00000477507 416 ntBASIC1.64□□□□□ -2.15
CCDC58Q4VC31 RPL31P60-201ENST00000478450 367 ntBASIC1.64□□□□□ -2.15
CCDC58Q4VC31 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.64□□□□□ -2.15
CCDC58Q4VC31 NAA50-206ENST00000493454 964 ntTSL 2 BASIC1.64□□□□□ -2.15
CCDC58Q4VC31 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.64□□□□□ -2.15
CCDC58Q4VC31 SLC25A15P5-201ENST00000508033 253 ntBASIC1.64□□□□□ -2.15
CCDC58Q4VC31 RNU6-798P-201ENST00000516912 103 ntBASIC1.64□□□□□ -2.15
CCDC58Q4VC31 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.64□□□□□ -2.15
CCDC58Q4VC31 C1DP5-201ENST00000525775 383 ntBASIC1.64□□□□□ -2.15
CCDC58Q4VC31 AC118273.2-201ENST00000532092 465 ntBASIC1.64□□□□□ -2.15
CCDC58Q4VC31 AP002770.2-201ENST00000543613 532 ntBASIC1.64□□□□□ -2.15
CCDC58Q4VC31 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.64□□□□□ -2.15
CCDC58Q4VC31 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.64□□□□□ -2.15
CCDC58Q4VC31 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.64□□□□□ -2.15
CCDC58Q4VC31 AC068620.4-201ENST00000636730 1182 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms