Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 MIR4775-201ENST00000581168 75 ntBASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 AC002545.1-201ENST00000592511 181 ntBASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 RNU4-89P-201ENST00000607443 133 ntBASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 AC006133.1-201ENST00000617106 264 ntBASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 AC025034.2-201ENST00000623264 286 ntBASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
CCDC144BQ3MJ40 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
CCDC144BQ3MJ40 CKAP2P1-201ENST00000555477 2049 ntBASIC4.84□□□□□ -1.64
CCDC144BQ3MJ40 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
CCDC144BQ3MJ40 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
CCDC144BQ3MJ40 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 AL133383.2-201ENST00000622958 2336 ntBASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 SNORA24.1-201ENST00000384401 135 ntBASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 RPL21P65-201ENST00000406094 466 ntBASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 AC108032.1-201ENST00000416706 207 ntBASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 AL596276.1-201ENST00000434465 418 ntBASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 AC016691.1-201ENST00000441321 413 ntBASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 HMGB3P22-202ENST00000451823 572 ntBASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 AC087588.1-201ENST00000462203 316 ntBASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 GMFBP1-201ENST00000467831 427 ntBASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 AC034236.1-201ENST00000469891 373 ntBASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 AC078785.3-201ENST00000476607 425 ntBASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 AC092989.1-201ENST00000481235 277 ntBASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 AP002812.1-201ENST00000495378 474 ntBASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 SNORA31.3-201ENST00000516029 96 ntBASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 RNA5SP309-201ENST00000516670 106 ntBASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 OR5AL2P-201ENST00000532185 920 ntBASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 MIR3158-1-201ENST00000583596 81 ntBASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 AC067852.3-201ENST00000589177 561 ntBASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 NRBF2P5-201ENST00000603087 788 ntBASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 AC007546.1-201ENST00000619452 559 ntBASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC144BQ3MJ40 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 SNORA62.1-201ENST00000364287 154 ntBASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 Y_RNA.256-201ENST00000364594 104 ntBASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 RNU6-877P-201ENST00000383868 107 ntBASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 MIR554-201ENST00000384874 96 ntBASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 RNA5SP171-201ENST00000391071 115 ntBASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 AC114491.1-201ENST00000416095 246 ntBASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 RPL7P2-201ENST00000427639 268 ntBASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 MTND1P18-201ENST00000448191 573 ntBASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 RPL23AP81-201ENST00000455252 467 ntBASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 RNU6-420P-201ENST00000458780 107 ntBASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 AL163973.1-201ENST00000484753 577 ntBASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 AC108078.2-201ENST00000510750 236 ntBASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 VWA8P1-201ENST00000510889 176 ntBASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 RN7SKP60-201ENST00000516985 239 ntBASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 RNA5SP503-201ENST00000517047 117 ntBASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 RNU1-45P-201ENST00000517191 141 ntBASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 RN7SKP289-201ENST00000517244 295 ntBASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 MTND1P35-201ENST00000526739 508 ntBASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 AC135001.1-201ENST00000544546 283 ntBASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 AL133241.1-201ENST00000556832 487 ntBASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 AC053481.4-201ENST00000583164 216 ntBASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 AC106900.2-201ENST00000604994 317 ntBASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 AC064801.1-201ENST00000612025 407 ntBASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 AL354950.2-201ENST00000617939 290 ntBASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 FER-210ENST00000628534 558 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC144BQ3MJ40 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CCDC144BQ3MJ40 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC144BQ3MJ40 RNU6-996P-201ENST00000365438 107 ntBASIC4.81□□□□□ -1.64
CCDC144BQ3MJ40 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC144BQ3MJ40 AC068050.1-201ENST00000394891 380 ntBASIC4.81□□□□□ -1.64
CCDC144BQ3MJ40 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.81□□□□□ -1.64
CCDC144BQ3MJ40 CYCSP19-201ENST00000411715 316 ntBASIC4.81□□□□□ -1.64
CCDC144BQ3MJ40 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms