Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 MTND4LP5-201ENST00000605152 292 ntBASIC4.93□□□□□ -1.62
PCDH1Q08174 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.93□□□□□ -1.62
PCDH1Q08174 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.93□□□□□ -1.62
PCDH1Q08174 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.93□□□□□ -1.62
PCDH1Q08174 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
PCDH1Q08174 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
PCDH1Q08174 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
PCDH1Q08174 AP001642.1-201ENST00000624727 2117 ntBASIC4.93□□□□□ -1.62
PCDH1Q08174 AC005183.1-201ENST00000603687 1979 ntBASIC4.93□□□□□ -1.62
PCDH1Q08174 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.93□□□□□ -1.62
PCDH1Q08174 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PCDH1Q08174 AC032011.1-201ENST00000611703 1549 ntBASIC4.92□□□□□ -1.62
PCDH1Q08174 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDH1Q08174 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.92□□□□□ -1.62
PCDH1Q08174 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.92□□□□□ -1.62
PCDH1Q08174 ZNF285B-201ENST00000561698 1767 ntBASIC4.92□□□□□ -1.62
PCDH1Q08174 AC100778.3-201ENST00000580060 1750 ntBASIC4.92□□□□□ -1.62
PCDH1Q08174 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.92□□□□□ -1.62
PCDH1Q08174 RNU6-76P-201ENST00000384060 104 ntBASIC4.92□□□□□ -1.62
PCDH1Q08174 MIR600-201ENST00000385007 98 ntBASIC4.92□□□□□ -1.62
PCDH1Q08174 MIR1302-6-201ENST00000408466 90 ntBASIC4.92□□□□□ -1.62
PCDH1Q08174 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.92□□□□□ -1.62
PCDH1Q08174 RPS15AP6-201ENST00000420703 385 ntBASIC4.92□□□□□ -1.62
PCDH1Q08174 RPS29P9-201ENST00000440360 171 ntBASIC4.92□□□□□ -1.62
PCDH1Q08174 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.92□□□□□ -1.62
PCDH1Q08174 AL389915.2-201ENST00000454576 441 ntBASIC4.92□□□□□ -1.62
PCDH1Q08174 AC133473.1-201ENST00000455173 299 ntBASIC4.92□□□□□ -1.62
PCDH1Q08174 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.92□□□□□ -1.62
PCDH1Q08174 AC097484.1-201ENST00000471148 389 ntBASIC4.92□□□□□ -1.62
PCDH1Q08174 Y_RNA.680-201ENST00000516441 93 ntBASIC4.92□□□□□ -1.62
PCDH1Q08174 SNORA31.22-201ENST00000517204 135 ntBASIC4.92□□□□□ -1.62
PCDH1Q08174 AC008694.2-201ENST00000517591 306 ntBASIC4.92□□□□□ -1.62
PCDH1Q08174 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.92□□□□□ -1.62
PCDH1Q08174 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.92□□□□□ -1.62
PCDH1Q08174 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.92□□□□□ -1.62
PCDH1Q08174 AP000889.1-201ENST00000530968 660 ntBASIC4.92□□□□□ -1.62
PCDH1Q08174 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.92□□□□□ -1.62
PCDH1Q08174 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.92□□□□□ -1.62
PCDH1Q08174 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.92□□□□□ -1.62
PCDH1Q08174 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.92□□□□□ -1.62
PCDH1Q08174 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.92□□□□□ -1.62
PCDH1Q08174 LRRC37A5P-203ENST00000580181 585 ntBASIC4.92□□□□□ -1.62
PCDH1Q08174 MIR548AC-201ENST00000585049 88 ntBASIC4.92□□□□□ -1.62
PCDH1Q08174 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.92□□□□□ -1.62
PCDH1Q08174 BDH2P1-201ENST00000602288 736 ntBASIC4.92□□□□□ -1.62
PCDH1Q08174 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDH1Q08174 IRF5P1-201ENST00000504852 2164 ntBASIC4.92□□□□□ -1.62
PCDH1Q08174 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
PCDH1Q08174 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.92□□□□□ -1.62
PCDH1Q08174 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.92□□□□□ -1.62
PCDH1Q08174 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
PCDH1Q08174 MTND5P27-201ENST00000428871 1720 ntBASIC4.92□□□□□ -1.62
PCDH1Q08174 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.92□□□□□ -1.62
PCDH1Q08174 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.91□□□□□ -1.62
PCDH1Q08174 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PCDH1Q08174 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.91□□□□□ -1.62
PCDH1Q08174 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.91□□□□□ -1.62
PCDH1Q08174 AC010615.1-201ENST00000594254 1764 ntBASIC4.91□□□□□ -1.62
PCDH1Q08174 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PCDH1Q08174 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
PCDH1Q08174 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDH1Q08174 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PCDH1Q08174 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDH1Q08174 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDH1Q08174 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PCDH1Q08174 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PCDH1Q08174 Y_RNA.48-201ENST00000362710 103 ntBASIC4.91□□□□□ -1.62
PCDH1Q08174 Y_RNA.222-201ENST00000364264 102 ntBASIC4.91□□□□□ -1.62
PCDH1Q08174 RNU6-209P-201ENST00000384118 107 ntBASIC4.91□□□□□ -1.62
PCDH1Q08174 Y_RNA.534-201ENST00000384599 112 ntBASIC4.91□□□□□ -1.62
PCDH1Q08174 MIR223-201ENST00000385204 110 ntBASIC4.91□□□□□ -1.62
PCDH1Q08174 DUTP5-201ENST00000406790 469 ntBASIC4.91□□□□□ -1.62
PCDH1Q08174 U3.35-201ENST00000408405 208 ntBASIC4.91□□□□□ -1.62
PCDH1Q08174 RNU2-64P-201ENST00000411315 191 ntBASIC4.91□□□□□ -1.62
PCDH1Q08174 DDX39BP1-205ENST00000422507 192 ntBASIC4.91□□□□□ -1.62
PCDH1Q08174 AL355433.1-201ENST00000422804 300 ntBASIC4.91□□□□□ -1.62
PCDH1Q08174 UBE2D3P2-201ENST00000424409 445 ntBASIC4.91□□□□□ -1.62
PCDH1Q08174 RPS20P1-201ENST00000434853 354 ntBASIC4.91□□□□□ -1.62
PCDH1Q08174 AL450023.3-201ENST00000440592 271 ntBASIC4.91□□□□□ -1.62
PCDH1Q08174 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDH1Q08174 SNORD127-201ENST00000458892 86 ntBASIC4.91□□□□□ -1.62
PCDH1Q08174 RPS17P2-201ENST00000461663 408 ntBASIC4.91□□□□□ -1.62
PCDH1Q08174 RN7SL443P-201ENST00000464331 290 ntBASIC4.91□□□□□ -1.62
PCDH1Q08174 AC069499.1-201ENST00000489433 509 ntBASIC4.91□□□□□ -1.62
PCDH1Q08174 RN7SL346P-201ENST00000491561 294 ntBASIC4.91□□□□□ -1.62
PCDH1Q08174 SNRPCP2-201ENST00000504370 475 ntBASIC4.91□□□□□ -1.62
PCDH1Q08174 RNU7-4P-201ENST00000516961 62 ntBASIC4.91□□□□□ -1.62
PCDH1Q08174 AC012339.2-201ENST00000523996 453 ntBASIC4.91□□□□□ -1.62
PCDH1Q08174 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.91□□□□□ -1.62
PCDH1Q08174 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDH1Q08174 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.91□□□□□ -1.62
PCDH1Q08174 MIR1269B-201ENST00000580405 75 ntBASIC4.91□□□□□ -1.62
PCDH1Q08174 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.91□□□□□ -1.62
PCDH1Q08174 OR7E18P-201ENST00000592589 702 ntBASIC4.91□□□□□ -1.62
PCDH1Q08174 AC211433.2-201ENST00000608433 387 ntBASIC4.91□□□□□ -1.62
PCDH1Q08174 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.91□□□□□ -1.62
PCDH1Q08174 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.91□□□□□ -1.62
PCDH1Q08174 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PCDH1Q08174 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.91□□□□□ -1.62
PCDH1Q08174 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.9□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms