Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.15□□□□□ -1.91
GABPAQ06546 AC004866.2-201ENST00000438285 481 ntBASIC3.15□□□□□ -1.91
GABPAQ06546 AL117351.1-201ENST00000438864 766 ntBASIC3.15□□□□□ -1.91
GABPAQ06546 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.15□□□□□ -1.91
GABPAQ06546 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.15□□□□□ -1.91
GABPAQ06546 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.15□□□□□ -1.91
GABPAQ06546 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.15□□□□□ -1.91
GABPAQ06546 HMGB1P36-201ENST00000487709 576 ntBASIC3.15□□□□□ -1.91
GABPAQ06546 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.15□□□□□ -1.91
GABPAQ06546 AC010265.1-201ENST00000513509 211 ntBASIC3.15□□□□□ -1.91
GABPAQ06546 AC114781.4-201ENST00000513707 639 ntBASIC3.15□□□□□ -1.91
GABPAQ06546 RNU1-61P-201ENST00000516107 151 ntBASIC3.15□□□□□ -1.91
GABPAQ06546 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
GABPAQ06546 AP003461.1-201ENST00000528866 78 ntBASIC3.15□□□□□ -1.91
GABPAQ06546 AP000857.1-201ENST00000532151 543 ntBASIC3.15□□□□□ -1.91
GABPAQ06546 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.15□□□□□ -1.91
GABPAQ06546 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.15□□□□□ -1.91
GABPAQ06546 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.15□□□□□ -1.91
GABPAQ06546 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.15□□□□□ -1.91
GABPAQ06546 AP005205.1-201ENST00000563503 508 ntBASIC3.15□□□□□ -1.91
GABPAQ06546 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.15□□□□□ -1.91
GABPAQ06546 AC034268.2-201ENST00000571784 482 ntBASIC3.15□□□□□ -1.91
GABPAQ06546 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.15□□□□□ -1.91
GABPAQ06546 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
GABPAQ06546 AC106900.2-201ENST00000604994 317 ntBASIC3.15□□□□□ -1.91
GABPAQ06546 AC090186.1-201ENST00000605991 572 ntBASIC3.15□□□□□ -1.91
GABPAQ06546 AC004832.5-201ENST00000608677 401 ntBASIC3.15□□□□□ -1.91
GABPAQ06546 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
GABPAQ06546 AL356596.1-201ENST00000624230 379 ntBASIC3.15□□□□□ -1.91
GABPAQ06546 AC007490.1-201ENST00000624321 703 ntBASIC3.15□□□□□ -1.91
GABPAQ06546 AC008993.2-201ENST00000631744 806 ntBASIC3.15□□□□□ -1.91
GABPAQ06546 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
GABPAQ06546 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
GABPAQ06546 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.15□□□□□ -1.91
GABPAQ06546 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
GABPAQ06546 AL513185.3-201ENST00000433335 1300 ntBASIC3.15□□□□□ -1.91
GABPAQ06546 MTND5P19-201ENST00000424872 1794 ntBASIC3.15□□□□□ -1.91
GABPAQ06546 MTCO1P9-201ENST00000505577 1534 ntBASIC3.14□□□□□ -1.91
GABPAQ06546 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
GABPAQ06546 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.14□□□□□ -1.91
GABPAQ06546 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.14□□□□□ -1.91
GABPAQ06546 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
GABPAQ06546 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
GABPAQ06546 RPL9P7-201ENST00000330965 580 ntBASIC3.14□□□□□ -1.91
GABPAQ06546 FTLP6-201ENST00000355274 422 ntBASIC3.14□□□□□ -1.91
GABPAQ06546 RNU6-744P-201ENST00000365557 107 ntBASIC3.14□□□□□ -1.91
GABPAQ06546 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
GABPAQ06546 XGY1-201ENST00000381172 446 ntBASIC3.14□□□□□ -1.91
GABPAQ06546 RNU6-1316P-201ENST00000384242 108 ntBASIC3.14□□□□□ -1.91
GABPAQ06546 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
GABPAQ06546 RPS3AP26-201ENST00000398259 784 ntBASIC3.14□□□□□ -1.91
GABPAQ06546 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.14□□□□□ -1.91
GABPAQ06546 RNU2-43P-201ENST00000410306 190 ntBASIC3.14□□□□□ -1.91
GABPAQ06546 RNU4-65P-201ENST00000410473 140 ntBASIC3.14□□□□□ -1.91
GABPAQ06546 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.14□□□□□ -1.91
GABPAQ06546 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.14□□□□□ -1.91
GABPAQ06546 HMGN2P20-201ENST00000437531 273 ntBASIC3.14□□□□□ -1.91
GABPAQ06546 AL354941.1-201ENST00000438600 464 ntBASIC3.14□□□□□ -1.91
GABPAQ06546 LSM1P1-201ENST00000438629 273 ntBASIC3.14□□□□□ -1.91
GABPAQ06546 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.14□□□□□ -1.91
GABPAQ06546 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.14□□□□□ -1.91
GABPAQ06546 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.14□□□□□ -1.91
GABPAQ06546 AL109741.2-201ENST00000455561 343 ntBASIC3.14□□□□□ -1.91
GABPAQ06546 ARPC3P2-201ENST00000457786 533 ntBASIC3.14□□□□□ -1.91
GABPAQ06546 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.14□□□□□ -1.91
GABPAQ06546 RPS23P3-201ENST00000470993 430 ntBASIC3.14□□□□□ -1.91
GABPAQ06546 AC012181.1-201ENST00000479895 423 ntBASIC3.14□□□□□ -1.91
GABPAQ06546 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.14□□□□□ -1.91
GABPAQ06546 AC118282.1-201ENST00000506408 765 ntBASIC3.14□□□□□ -1.91
GABPAQ06546 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.14□□□□□ -1.91
GABPAQ06546 MTND4LP22-201ENST00000508209 276 ntBASIC3.14□□□□□ -1.91
GABPAQ06546 AC105914.1-201ENST00000511798 226 ntBASIC3.14□□□□□ -1.91
GABPAQ06546 AC112673.1-201ENST00000513168 575 ntBASIC3.14□□□□□ -1.91
GABPAQ06546 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.14□□□□□ -1.91
GABPAQ06546 SNORA3.4-201ENST00000515969 96 ntBASIC3.14□□□□□ -1.91
GABPAQ06546 RNA5SP380-201ENST00000517190 98 ntBASIC3.14□□□□□ -1.91
GABPAQ06546 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.14□□□□□ -1.91
GABPAQ06546 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.14□□□□□ -1.91
GABPAQ06546 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.14□□□□□ -1.91
GABPAQ06546 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.14□□□□□ -1.91
GABPAQ06546 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.14□□□□□ -1.91
GABPAQ06546 MTATP6P24-201ENST00000576835 677 ntBASIC3.14□□□□□ -1.91
GABPAQ06546 AL353997.4-201ENST00000586196 166 ntBASIC3.14□□□□□ -1.91
GABPAQ06546 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.14□□□□□ -1.91
GABPAQ06546 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.14□□□□□ -1.91
GABPAQ06546 AC013444.2-201ENST00000603317 787 ntBASIC3.14□□□□□ -1.91
GABPAQ06546 AC012443.1-201ENST00000605605 231 ntBASIC3.14□□□□□ -1.91
GABPAQ06546 MIR6817-201ENST00000615588 66 ntBASIC3.14□□□□□ -1.91
GABPAQ06546 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.14□□□□□ -1.91
GABPAQ06546 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.14□□□□□ -1.91
GABPAQ06546 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
GABPAQ06546 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
GABPAQ06546 AC011477.1-204ENST00000623416 1325 ntBASIC3.14□□□□□ -1.91
GABPAQ06546 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
GABPAQ06546 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.13□□□□□ -1.91
GABPAQ06546 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.13□□□□□ -1.91
GABPAQ06546 RNU6-1200P-201ENST00000384162 107 ntBASIC3.13□□□□□ -1.91
GABPAQ06546 RNU6-253P-201ENST00000384730 105 ntBASIC3.13□□□□□ -1.91
GABPAQ06546 RSL24D1P4-201ENST00000400938 484 ntBASIC3.13□□□□□ -1.91
GABPAQ06546 AL139039.1-201ENST00000401900 692 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms