Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 AC068339.2-201ENST00000534395 618 ntBASIC2.88□□□□□ -1.95
IRX3P78415 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.88□□□□□ -1.95
IRX3P78415 AC068620.3-201ENST00000602749 560 ntBASIC2.88□□□□□ -1.95
IRX3P78415 AC055876.5-201ENST00000605667 259 ntBASIC2.88□□□□□ -1.95
IRX3P78415 AL138955.1-201ENST00000622881 1040 ntBASIC2.88□□□□□ -1.95
IRX3P78415 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.88□□□□□ -1.95
IRX3P78415 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
IRX3P78415 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.87□□□□□ -1.95
IRX3P78415 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
IRX3P78415 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
IRX3P78415 RNU6-193P-201ENST00000410977 107 ntBASIC2.87□□□□□ -1.95
IRX3P78415 TMEM167AP1-201ENST00000423409 219 ntBASIC2.87□□□□□ -1.95
IRX3P78415 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.87□□□□□ -1.95
IRX3P78415 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.87□□□□□ -1.95
IRX3P78415 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.87□□□□□ -1.95
IRX3P78415 CACYBPP2-201ENST00000453625 678 ntBASIC2.87□□□□□ -1.95
IRX3P78415 AL139109.1-201ENST00000455491 297 ntBASIC2.87□□□□□ -1.95
IRX3P78415 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.87□□□□□ -1.95
IRX3P78415 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.87□□□□□ -1.95
IRX3P78415 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.87□□□□□ -1.95
IRX3P78415 RNU6-237P-201ENST00000515985 71 ntBASIC2.87□□□□□ -1.95
IRX3P78415 RNU6-1028P-201ENST00000517164 93 ntBASIC2.87□□□□□ -1.95
IRX3P78415 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.87□□□□□ -1.95
IRX3P78415 IGKV3-31-201ENST00000523109 329 ntBASIC2.87□□□□□ -1.95
IRX3P78415 MTCO3P15-201ENST00000526563 574 ntBASIC2.87□□□□□ -1.95
IRX3P78415 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
IRX3P78415 DEFB130C-202ENST00000530001 230 ntBASIC2.87□□□□□ -1.95
IRX3P78415 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.87□□□□□ -1.95
IRX3P78415 EEF1B2P4-201ENST00000551398 348 ntBASIC2.87□□□□□ -1.95
IRX3P78415 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.87□□□□□ -1.95
IRX3P78415 MIR4648-201ENST00000580107 72 ntBASIC2.87□□□□□ -1.95
IRX3P78415 AL158827.2-201ENST00000602494 330 ntBASIC2.87□□□□□ -1.95
IRX3P78415 AC010738.1-201ENST00000604970 987 ntBASIC2.87□□□□□ -1.95
IRX3P78415 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.87□□□□□ -1.95
IRX3P78415 CYP3A51P-201ENST00000633513 256 ntBASIC2.87□□□□□ -1.95
IRX3P78415 AL691447.3-201ENST00000635020 330 ntBASIC2.87□□□□□ -1.95
IRX3P78415 CRYM-AS1-204ENST00000637983 556 ntBASIC2.87□□□□□ -1.95
IRX3P78415 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
IRX3P78415 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
IRX3P78415 AC006020.1-201ENST00000420179 1854 ntBASIC2.86□□□□□ -1.95
IRX3P78415 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
IRX3P78415 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
IRX3P78415 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
IRX3P78415 RNU1-100P-201ENST00000365255 165 ntBASIC2.86□□□□□ -1.95
IRX3P78415 RN7SKP223-201ENST00000410582 62 ntBASIC2.86□□□□□ -1.95
IRX3P78415 RNU4-72P-201ENST00000410754 173 ntBASIC2.86□□□□□ -1.95
IRX3P78415 RNU4-78P-201ENST00000410940 126 ntBASIC2.86□□□□□ -1.95
IRX3P78415 AL356320.2-201ENST00000417263 507 ntBASIC2.86□□□□□ -1.95
IRX3P78415 AC092634.6-201ENST00000418558 192 ntBASIC2.86□□□□□ -1.95
IRX3P78415 MTCO3P1-205ENST00000422088 832 ntBASIC2.86□□□□□ -1.95
IRX3P78415 BX276092.3-201ENST00000424182 230 ntBASIC2.86□□□□□ -1.95
IRX3P78415 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.86□□□□□ -1.95
IRX3P78415 AL356320.1-201ENST00000429616 163 ntBASIC2.86□□□□□ -1.95
IRX3P78415 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.86□□□□□ -1.95
IRX3P78415 FAM103A2P-201ENST00000444122 354 ntBASIC2.86□□□□□ -1.95
IRX3P78415 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.86□□□□□ -1.95
IRX3P78415 MTCYBP11-201ENST00000447254 1109 ntBASIC2.86□□□□□ -1.95
IRX3P78415 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC2.86□□□□□ -1.95
IRX3P78415 MTND2P19-201ENST00000449129 1012 ntBASIC2.86□□□□□ -1.95
IRX3P78415 AC233279.1-201ENST00000455300 423 ntBASIC2.86□□□□□ -1.95
IRX3P78415 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
IRX3P78415 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.86□□□□□ -1.95
IRX3P78415 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.86□□□□□ -1.95
IRX3P78415 CKS1BP7-201ENST00000522230 235 ntBASIC2.86□□□□□ -1.95
IRX3P78415 AP001189.2-201ENST00000527320 189 ntBASIC2.86□□□□□ -1.95
IRX3P78415 NDUFS5P6-201ENST00000529136 295 ntBASIC2.86□□□□□ -1.95
IRX3P78415 AC021269.2-201ENST00000532318 330 ntBASIC2.86□□□□□ -1.95
IRX3P78415 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
IRX3P78415 AC087897.1-201ENST00000550134 156 ntBASIC2.86□□□□□ -1.95
IRX3P78415 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.86□□□□□ -1.95
IRX3P78415 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.86□□□□□ -1.95
IRX3P78415 MIR4524B-201ENST00000581569 115 ntBASIC2.86□□□□□ -1.95
IRX3P78415 AC098826.3-201ENST00000603823 466 ntBASIC2.86□□□□□ -1.95
IRX3P78415 AP002371.2-201ENST00000624450 503 ntBASIC2.86□□□□□ -1.95
IRX3P78415 AP000720.1-201ENST00000625091 483 ntBASIC2.86□□□□□ -1.95
IRX3P78415 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.86□□□□□ -1.95
IRX3P78415 MFSD8-245ENST00000641743 948 ntBASIC2.86□□□□□ -1.95
IRX3P78415 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
IRX3P78415 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.86□□□□□ -1.95
IRX3P78415 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.85□□□□□ -1.95
IRX3P78415 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
IRX3P78415 RNU6-989P-201ENST00000362756 107 ntBASIC2.85□□□□□ -1.95
IRX3P78415 SNORD82-201ENST00000365530 70 ntBASIC2.85□□□□□ -1.95
IRX3P78415 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
IRX3P78415 RNU1-73P-201ENST00000383971 164 ntBASIC2.85□□□□□ -1.95
IRX3P78415 RNU6-878P-201ENST00000384578 110 ntBASIC2.85□□□□□ -1.95
IRX3P78415 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
IRX3P78415 AL079342.2-201ENST00000403367 482 ntBASIC2.85□□□□□ -1.95
IRX3P78415 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.85□□□□□ -1.95
IRX3P78415 USP9YP21-201ENST00000420603 432 ntBASIC2.85□□□□□ -1.95
IRX3P78415 AL035410.1-201ENST00000427409 427 ntBASIC2.85□□□□□ -1.95
IRX3P78415 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.85□□□□□ -1.95
IRX3P78415 RPL23AP74-201ENST00000437246 471 ntBASIC2.85□□□□□ -1.95
IRX3P78415 AL445687.1-201ENST00000439946 251 ntBASIC2.85□□□□□ -1.95
IRX3P78415 MRPL50P4-201ENST00000446432 475 ntBASIC2.85□□□□□ -1.95
IRX3P78415 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.85□□□□□ -1.95
IRX3P78415 AC013828.1-201ENST00000481845 158 ntBASIC2.85□□□□□ -1.95
IRX3P78415 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
IRX3P78415 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.85□□□□□ -1.95
IRX3P78415 AC112198.4-201ENST00000515450 351 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms