Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.64□□□□□ -1.67
HERVK_113P62684 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.64□□□□□ -1.67
HERVK_113P62684 AL133153.1-201ENST00000557756 303 ntBASIC4.64□□□□□ -1.67
HERVK_113P62684 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.64□□□□□ -1.67
HERVK_113P62684 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.64□□□□□ -1.67
HERVK_113P62684 RPL23AP87-202ENST00000573039 466 ntBASIC4.64□□□□□ -1.67
HERVK_113P62684 AC010591.1-201ENST00000603941 649 ntBASIC4.64□□□□□ -1.67
HERVK_113P62684 uc_338.5-201ENST00000611839 155 ntBASIC4.64□□□□□ -1.67
HERVK_113P62684 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.64□□□□□ -1.67
HERVK_113P62684 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HERVK_113P62684 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.64□□□□□ -1.67
HERVK_113P62684 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HERVK_113P62684 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HERVK_113P62684 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
HERVK_113P62684 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HERVK_113P62684 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.64□□□□□ -1.67
HERVK_113P62684 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HERVK_113P62684 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HERVK_113P62684 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HERVK_113P62684 ZNF285B-201ENST00000561698 1767 ntBASIC4.63□□□□□ -1.67
HERVK_113P62684 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.63□□□□□ -1.67
HERVK_113P62684 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.63□□□□□ -1.67
HERVK_113P62684 AL359893.1-201ENST00000447628 1580 ntBASIC4.63□□□□□ -1.67
HERVK_113P62684 MIR454-201ENST00000390180 115 ntBASIC4.63□□□□□ -1.67
HERVK_113P62684 RNU6-510P-201ENST00000391239 108 ntBASIC4.63□□□□□ -1.67
HERVK_113P62684 RN7SKP32-201ENST00000410167 303 ntBASIC4.63□□□□□ -1.67
HERVK_113P62684 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.63□□□□□ -1.67
HERVK_113P62684 MTATP6P16-201ENST00000434543 526 ntBASIC4.63□□□□□ -1.67
HERVK_113P62684 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.63□□□□□ -1.67
HERVK_113P62684 RPS17P13-201ENST00000448974 407 ntBASIC4.63□□□□□ -1.67
HERVK_113P62684 MTND3P16-201ENST00000452205 344 ntBASIC4.63□□□□□ -1.67
HERVK_113P62684 MTND1P9-201ENST00000453775 944 ntBASIC4.63□□□□□ -1.67
HERVK_113P62684 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.63□□□□□ -1.67
HERVK_113P62684 RN7SL585P-201ENST00000470538 280 ntBASIC4.63□□□□□ -1.67
HERVK_113P62684 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.63□□□□□ -1.67
HERVK_113P62684 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.63□□□□□ -1.67
HERVK_113P62684 AC105417.1-201ENST00000514691 285 ntBASIC4.63□□□□□ -1.67
HERVK_113P62684 RNU4-29P-201ENST00000515943 174 ntBASIC4.63□□□□□ -1.67
HERVK_113P62684 RNU2-10P-201ENST00000516375 211 ntBASIC4.63□□□□□ -1.67
HERVK_113P62684 RNU7-143P-201ENST00000516781 65 ntBASIC4.63□□□□□ -1.67
HERVK_113P62684 RNA5SP179-201ENST00000517284 121 ntBASIC4.63□□□□□ -1.67
HERVK_113P62684 AC026403.1-201ENST00000518938 295 ntBASIC4.63□□□□□ -1.67
HERVK_113P62684 SUMO2P20-201ENST00000520803 283 ntBASIC4.63□□□□□ -1.67
HERVK_113P62684 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.63□□□□□ -1.67
HERVK_113P62684 AC087241.2-201ENST00000535801 324 ntBASIC4.63□□□□□ -1.67
HERVK_113P62684 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.63□□□□□ -1.67
HERVK_113P62684 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.63□□□□□ -1.67
HERVK_113P62684 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.63□□□□□ -1.67
HERVK_113P62684 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.63□□□□□ -1.67
HERVK_113P62684 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.63□□□□□ -1.67
HERVK_113P62684 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.63□□□□□ -1.67
HERVK_113P62684 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.63□□□□□ -1.67
HERVK_113P62684 AC067931.1-201ENST00000624190 671 ntBASIC4.63□□□□□ -1.67
HERVK_113P62684 MIR4496-201ENST00000635896 61 ntBASIC4.63□□□□□ -1.67
HERVK_113P62684 TPTEP1-208ENST00000636884 213 ntBASIC4.63□□□□□ -1.67
HERVK_113P62684 MIR1302-1-201ENST00000637932 143 ntBASIC4.63□□□□□ -1.67
HERVK_113P62684 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.63□□□□□ -1.67
HERVK_113P62684 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.63□□□□□ -1.67
HERVK_113P62684 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
HERVK_113P62684 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HERVK_113P62684 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HERVK_113P62684 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HERVK_113P62684 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HERVK_113P62684 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
HERVK_113P62684 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
HERVK_113P62684 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HERVK_113P62684 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HERVK_113P62684 SNORD35B-201ENST00000363660 87 ntBASIC4.62□□□□□ -1.67
HERVK_113P62684 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HERVK_113P62684 LAP3P1-201ENST00000403648 294 ntBASIC4.62□□□□□ -1.67
HERVK_113P62684 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.62□□□□□ -1.67
HERVK_113P62684 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.62□□□□□ -1.67
HERVK_113P62684 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.62□□□□□ -1.67
HERVK_113P62684 MTCO3P46-201ENST00000425787 232 ntBASIC4.62□□□□□ -1.67
HERVK_113P62684 MED13P1-201ENST00000428342 171 ntBASIC4.62□□□□□ -1.67
HERVK_113P62684 SRIP2-201ENST00000428470 166 ntBASIC4.62□□□□□ -1.67
HERVK_113P62684 AC091286.1-201ENST00000431233 461 ntBASIC4.62□□□□□ -1.67
HERVK_113P62684 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.62□□□□□ -1.67
HERVK_113P62684 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.62□□□□□ -1.67
HERVK_113P62684 PRSS3P4-201ENST00000453323 162 ntBASIC4.62□□□□□ -1.67
HERVK_113P62684 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.62□□□□□ -1.67
HERVK_113P62684 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.62□□□□□ -1.67
HERVK_113P62684 AC116562.3-201ENST00000506136 177 ntBASIC4.62□□□□□ -1.67
HERVK_113P62684 AC004062.1-201ENST00000509926 645 ntBASIC4.62□□□□□ -1.67
HERVK_113P62684 HIGD1AP3-201ENST00000515857 278 ntBASIC4.62□□□□□ -1.67
HERVK_113P62684 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.62□□□□□ -1.67
HERVK_113P62684 AC068587.5-201ENST00000528506 175 ntBASIC4.62□□□□□ -1.67
HERVK_113P62684 OR5BN1P-201ENST00000532955 829 ntBASIC4.62□□□□□ -1.67
HERVK_113P62684 HPRT1P3-201ENST00000539521 576 ntBASIC4.62□□□□□ -1.67
HERVK_113P62684 YPEL5P3-201ENST00000547227 352 ntBASIC4.62□□□□□ -1.67
HERVK_113P62684 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.62□□□□□ -1.67
HERVK_113P62684 AL355375.2-201ENST00000574825 175 ntBASIC4.62□□□□□ -1.67
HERVK_113P62684 AC087499.8-201ENST00000578406 226 ntBASIC4.62□□□□□ -1.67
HERVK_113P62684 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
HERVK_113P62684 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.62□□□□□ -1.67
HERVK_113P62684 AC091167.4-201ENST00000605079 184 ntBASIC4.62□□□□□ -1.67
HERVK_113P62684 AL050343.2-201ENST00000607338 280 ntBASIC4.62□□□□□ -1.67
HERVK_113P62684 BMS1P21-201ENST00000634565 365 ntBASIC4.62□□□□□ -1.67
HERVK_113P62684 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.62□□□□□ -1.67
HERVK_113P62684 Z82217.1-201ENST00000625157 8149 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 146.7 ms