Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AC005951.1-201ENST00000576706 485 ntBASIC3.32□□□□□ -1.88
CLDN20P56880 MIR4429-201ENST00000580105 73 ntBASIC3.32□□□□□ -1.88
CLDN20P56880 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.32□□□□□ -1.88
CLDN20P56880 AC004067.1-201ENST00000608733 700 ntBASIC3.32□□□□□ -1.88
CLDN20P56880 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.32□□□□□ -1.88
CLDN20P56880 AC006338.1-201ENST00000618453 749 ntBASIC3.32□□□□□ -1.88
CLDN20P56880 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CLDN20P56880 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.32□□□□□ -1.88
CLDN20P56880 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.32□□□□□ -1.88
CLDN20P56880 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
CLDN20P56880 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.32□□□□□ -1.88
CLDN20P56880 AC005832.2-201ENST00000538921 1430 ntBASIC3.32□□□□□ -1.88
CLDN20P56880 PWAR6-201ENST00000552334 4618 ntBASIC3.32□□□□□ -1.88
CLDN20P56880 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
CLDN20P56880 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.32□□□□□ -1.88
CLDN20P56880 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLDN20P56880 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.31□□□□□ -1.88
CLDN20P56880 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN20P56880 AC116096.1-201ENST00000566804 2314 ntBASIC3.31□□□□□ -1.88
CLDN20P56880 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.31□□□□□ -1.88
CLDN20P56880 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN20P56880 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.31□□□□□ -1.88
CLDN20P56880 RNU6-600P-201ENST00000362524 99 ntBASIC3.31□□□□□ -1.88
CLDN20P56880 Y_RNA.41-201ENST00000362646 102 ntBASIC3.31□□□□□ -1.88
CLDN20P56880 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN20P56880 RNU6-1215P-201ENST00000384441 102 ntBASIC3.31□□□□□ -1.88
CLDN20P56880 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CLDN20P56880 AL136116.1-201ENST00000403591 381 ntBASIC3.31□□□□□ -1.88
CLDN20P56880 RNA5SP107-201ENST00000411358 122 ntBASIC3.31□□□□□ -1.88
CLDN20P56880 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN20P56880 RPL21P24-201ENST00000413752 448 ntBASIC3.31□□□□□ -1.88
CLDN20P56880 SYF2P2-201ENST00000417620 583 ntBASIC3.31□□□□□ -1.88
CLDN20P56880 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN20P56880 ELOCP4-201ENST00000420090 333 ntBASIC3.31□□□□□ -1.88
CLDN20P56880 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN20P56880 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN20P56880 NANOGNBP1-201ENST00000448444 480 ntBASIC3.31□□□□□ -1.88
CLDN20P56880 AC079448.1-201ENST00000449377 373 ntBASIC3.31□□□□□ -1.88
CLDN20P56880 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.31□□□□□ -1.88
CLDN20P56880 RPL23AP31-201ENST00000456160 467 ntBASIC3.31□□□□□ -1.88
CLDN20P56880 AC010401.1-201ENST00000463867 348 ntBASIC3.31□□□□□ -1.88
CLDN20P56880 AC092451.1-201ENST00000480211 153 ntBASIC3.31□□□□□ -1.88
CLDN20P56880 RPL21P129-201ENST00000491732 478 ntBASIC3.31□□□□□ -1.88
CLDN20P56880 AP002812.1-201ENST00000495378 474 ntBASIC3.31□□□□□ -1.88
CLDN20P56880 RPL23AP55-201ENST00000498163 452 ntBASIC3.31□□□□□ -1.88
CLDN20P56880 RNU6-64P-201ENST00000517119 105 ntBASIC3.31□□□□□ -1.88
CLDN20P56880 AC011979.2-201ENST00000527568 352 ntBASIC3.31□□□□□ -1.88
CLDN20P56880 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN20P56880 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.31□□□□□ -1.88
CLDN20P56880 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.31□□□□□ -1.88
CLDN20P56880 TGIF1P1-201ENST00000558095 802 ntBASIC3.31□□□□□ -1.88
CLDN20P56880 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN20P56880 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC3.31□□□□□ -1.88
CLDN20P56880 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.31□□□□□ -1.88
CLDN20P56880 KLKP1-201ENST00000595979 403 ntBASIC3.31□□□□□ -1.88
CLDN20P56880 DEFB131E-202ENST00000602581 683 ntBASIC3.31□□□□□ -1.88
CLDN20P56880 AC013476.2-201ENST00000614456 459 ntBASIC3.31□□□□□ -1.88
CLDN20P56880 AL355810.1-201ENST00000614629 552 ntBASIC3.31□□□□□ -1.88
CLDN20P56880 AC138649.3-201ENST00000622154 254 ntBASIC3.31□□□□□ -1.88
CLDN20P56880 AC068880.5-201ENST00000624331 290 ntBASIC3.31□□□□□ -1.88
CLDN20P56880 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.31□□□□□ -1.88
CLDN20P56880 OR5AK4P-201ENST00000635912 903 ntBASIC3.31□□□□□ -1.88
CLDN20P56880 AL034408.1-202ENST00000636088 415 ntBASIC3.31□□□□□ -1.88
CLDN20P56880 AP000553.6-201ENST00000641242 118 ntBASIC3.31□□□□□ -1.88
CLDN20P56880 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN20P56880 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.31□□□□□ -1.88
CLDN20P56880 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN20P56880 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN20P56880 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLDN20P56880 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN20P56880 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CLDN20P56880 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN20P56880 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
CLDN20P56880 AC092326.2-201ENST00000624772 1561 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN20P56880 MTND4P5-201ENST00000435821 1374 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.3□□□□□ -1.88
CLDN20P56880 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CLDN20P56880 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN20P56880 RNY1P12-201ENST00000364251 105 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 RN7SKP226-201ENST00000364912 300 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 Y_RNA.296-201ENST00000364930 108 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 SNORA23-201ENST00000365128 182 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 AP002088.1-201ENST00000382740 395 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 SNORA20.2-201ENST00000383922 131 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 MIR200C-201ENST00000384980 68 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN20P56880 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN20P56880 Y_RNA.599-201ENST00000410489 109 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 RNU6-55P-201ENST00000411092 107 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 RNU6-954P-201ENST00000411355 107 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN20P56880 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN20P56880 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLDN20P56880 HMGB3P20-201ENST00000417997 600 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.3□□□□□ -1.88
CLDN20P56880 AC007283.2-201ENST00000424739 197 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 AC133104.1-201ENST00000429100 218 ntBASIC3.3□□□□□ -1.88
CLDN20P56880 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.3□□□□□ -1.88
CLDN20P56880 AL358934.1-201ENST00000432346 324 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms