Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 CASP1P1-201ENST00000526345 212 ntBASIC4.01□□□□□ -1.77
NEK3P51956 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.01□□□□□ -1.77
NEK3P51956 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.01□□□□□ -1.77
NEK3P51956 AC004223.2-201ENST00000590309 544 ntBASIC4.01□□□□□ -1.77
NEK3P51956 AC091805.2-201ENST00000603848 235 ntBASIC4.01□□□□□ -1.77
NEK3P51956 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.01□□□□□ -1.77
NEK3P51956 AC034229.5-201ENST00000624258 185 ntBASIC4.01□□□□□ -1.77
NEK3P51956 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.01□□□□□ -1.77
NEK3P51956 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.01□□□□□ -1.77
NEK3P51956 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
NEK3P51956 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.01□□□□□ -1.77
NEK3P51956 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
NEK3P51956 AC091152.2-201ENST00000591628 2569 ntBASIC4.01□□□□□ -1.77
NEK3P51956 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.01□□□□□ -1.77
NEK3P51956 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
NEK3P51956 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
NEK3P51956 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
NEK3P51956 AC007656.2-201ENST00000624902 4547 ntBASIC4□□□□□ -1.77
NEK3P51956 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4□□□□□ -1.77
NEK3P51956 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
NEK3P51956 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
NEK3P51956 RNU6-169P-201ENST00000365336 107 ntBASIC4□□□□□ -1.77
NEK3P51956 SNORD116-4-201ENST00000384733 96 ntBASIC4□□□□□ -1.77
NEK3P51956 PTMAP5-201ENST00000393073 333 ntBASIC4□□□□□ -1.77
NEK3P51956 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4□□□□□ -1.77
NEK3P51956 RN7SKP27-201ENST00000410684 333 ntBASIC4□□□□□ -1.77
NEK3P51956 RHEBP3-201ENST00000411920 351 ntBASIC4□□□□□ -1.77
NEK3P51956 MTCO3P41-201ENST00000414801 328 ntBASIC4□□□□□ -1.77
NEK3P51956 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4□□□□□ -1.77
NEK3P51956 BX295541.1-201ENST00000417774 250 ntBASIC4□□□□□ -1.77
NEK3P51956 USP9YP36-201ENST00000424581 829 ntBASIC4□□□□□ -1.77
NEK3P51956 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4□□□□□ -1.77
NEK3P51956 AC091390.3-201ENST00000426478 338 ntBASIC4□□□□□ -1.77
NEK3P51956 AC017083.1-201ENST00000428093 483 ntBASIC4□□□□□ -1.77
NEK3P51956 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4□□□□□ -1.77
NEK3P51956 RPL31P35-201ENST00000431058 377 ntBASIC4□□□□□ -1.77
NEK3P51956 RPL23AP69-201ENST00000431134 458 ntBASIC4□□□□□ -1.77
NEK3P51956 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4□□□□□ -1.77
NEK3P51956 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4□□□□□ -1.77
NEK3P51956 OFD1P4Y-201ENST00000455273 1179 ntBASIC4□□□□□ -1.77
NEK3P51956 TPT1P7-201ENST00000458300 517 ntBASIC4□□□□□ -1.77
NEK3P51956 RNU6-953P-201ENST00000459154 107 ntBASIC4□□□□□ -1.77
NEK3P51956 AC138853.1-201ENST00000503549 823 ntBASIC4□□□□□ -1.77
NEK3P51956 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4□□□□□ -1.77
NEK3P51956 RNU6-410P-201ENST00000517006 107 ntBASIC4□□□□□ -1.77
NEK3P51956 RNA5SP179-201ENST00000517284 121 ntBASIC4□□□□□ -1.77
NEK3P51956 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4□□□□□ -1.77
NEK3P51956 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4□□□□□ -1.77
NEK3P51956 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4□□□□□ -1.77
NEK3P51956 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4□□□□□ -1.77
NEK3P51956 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4□□□□□ -1.77
NEK3P51956 NCAPGP2-201ENST00000557911 754 ntBASIC4□□□□□ -1.77
NEK3P51956 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4□□□□□ -1.77
NEK3P51956 HMGB1P6-201ENST00000569046 646 ntBASIC4□□□□□ -1.77
NEK3P51956 AC010546.1-201ENST00000569391 485 ntBASIC4□□□□□ -1.77
NEK3P51956 MIR5685-201ENST00000579080 79 ntBASIC4□□□□□ -1.77
NEK3P51956 GLUD1P4-201ENST00000590914 418 ntBASIC4□□□□□ -1.77
NEK3P51956 AC104763.2-201ENST00000604179 382 ntBASIC4□□□□□ -1.77
NEK3P51956 AC091167.4-201ENST00000605079 184 ntBASIC4□□□□□ -1.77
NEK3P51956 AL139286.2-201ENST00000606838 396 ntBASIC4□□□□□ -1.77
NEK3P51956 AC136475.10-201ENST00000620253 385 ntBASIC4□□□□□ -1.77
NEK3P51956 AC006111.3-201ENST00000622137 383 ntBASIC4□□□□□ -1.77
NEK3P51956 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4□□□□□ -1.77
NEK3P51956 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4□□□□□ -1.77
NEK3P51956 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4□□□□□ -1.77
NEK3P51956 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4□□□□□ -1.77
NEK3P51956 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
NEK3P51956 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NEK3P51956 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
NEK3P51956 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
NEK3P51956 RNA5SP399-201ENST00000364003 117 ntBASIC3.99□□□□□ -1.77
NEK3P51956 RNU6-213P-201ENST00000384051 104 ntBASIC3.99□□□□□ -1.77
NEK3P51956 MIR554-201ENST00000384874 96 ntBASIC3.99□□□□□ -1.77
NEK3P51956 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.99□□□□□ -1.77
NEK3P51956 RNU6-195P-201ENST00000411352 109 ntBASIC3.99□□□□□ -1.77
NEK3P51956 CYCSP19-201ENST00000411715 316 ntBASIC3.99□□□□□ -1.77
NEK3P51956 AC092047.1-201ENST00000424997 240 ntBASIC3.99□□□□□ -1.77
NEK3P51956 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.99□□□□□ -1.77
NEK3P51956 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.99□□□□□ -1.77
NEK3P51956 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.99□□□□□ -1.77
NEK3P51956 AL512844.2-201ENST00000433990 593 ntBASIC3.99□□□□□ -1.77
NEK3P51956 GPR143P-201ENST00000434155 205 ntBASIC3.99□□□□□ -1.77
NEK3P51956 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.99□□□□□ -1.77
NEK3P51956 NEFMP1-201ENST00000443423 1006 ntBASIC3.99□□□□□ -1.77
NEK3P51956 MTATP6P30-201ENST00000443540 664 ntBASIC3.99□□□□□ -1.77
NEK3P51956 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.99□□□□□ -1.77
NEK3P51956 AC022364.2-201ENST00000457963 554 ntBASIC3.99□□□□□ -1.77
NEK3P51956 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.99□□□□□ -1.77
NEK3P51956 TPTE2P5-203ENST00000458118 728 ntBASIC3.99□□□□□ -1.77
NEK3P51956 TTC39CP1-201ENST00000512513 755 ntBASIC3.99□□□□□ -1.77
NEK3P51956 AC010493.1-201ENST00000513479 292 ntBASIC3.99□□□□□ -1.77
NEK3P51956 Y_RNA.655-201ENST00000515919 96 ntBASIC3.99□□□□□ -1.77
NEK3P51956 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.99□□□□□ -1.77
NEK3P51956 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.99□□□□□ -1.77
NEK3P51956 MIR1254-2-201ENST00000579553 63 ntBASIC3.99□□□□□ -1.77
NEK3P51956 MIR3609-201ENST00000582661 80 ntBASIC3.99□□□□□ -1.77
NEK3P51956 AC006130.2-201ENST00000586202 326 ntBASIC3.99□□□□□ -1.77
NEK3P51956 AC067852.3-201ENST00000589177 561 ntBASIC3.99□□□□□ -1.77
NEK3P51956 AL136363.2-201ENST00000604173 851 ntBASIC3.99□□□□□ -1.77
NEK3P51956 AC103591.3-201ENST00000608684 209 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms