Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
PRIM1P49642 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
PRIM1P49642 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
PRIM1P49642 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
PRIM1P49642 OR9K1P-202ENST00000641111 3217 ntBASIC6.65□□□□□ -1.34
PRIM1P49642 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.65□□□□□ -1.34
PRIM1P49642 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
PRIM1P49642 MIR411-201ENST00000362239 96 ntBASIC6.65□□□□□ -1.34
PRIM1P49642 RNU6-595P-201ENST00000363944 107 ntBASIC6.65□□□□□ -1.34
PRIM1P49642 RNU6-1303P-201ENST00000364841 107 ntBASIC6.65□□□□□ -1.34
PRIM1P49642 SNORA70.6-201ENST00000383934 134 ntBASIC6.65□□□□□ -1.34
PRIM1P49642 RNU6-339P-201ENST00000384310 107 ntBASIC6.65□□□□□ -1.34
PRIM1P49642 AC092809.3-201ENST00000415453 231 ntBASIC6.65□□□□□ -1.34
PRIM1P49642 AC099677.1-201ENST00000420575 175 ntBASIC6.65□□□□□ -1.34
PRIM1P49642 HMGB1P27-201ENST00000431429 603 ntBASIC6.65□□□□□ -1.34
PRIM1P49642 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
PRIM1P49642 AC004866.2-201ENST00000438285 481 ntBASIC6.65□□□□□ -1.34
PRIM1P49642 RPL7L1P1-201ENST00000448259 785 ntBASIC6.65□□□□□ -1.34
PRIM1P49642 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.65□□□□□ -1.34
PRIM1P49642 COX6CP14-201ENST00000469580 174 ntBASIC6.65□□□□□ -1.34
PRIM1P49642 RPL30P10-201ENST00000488148 337 ntBASIC6.65□□□□□ -1.34
PRIM1P49642 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC6.65□□□□□ -1.34
PRIM1P49642 SEPT14P8-201ENST00000508026 178 ntBASIC6.65□□□□□ -1.34
PRIM1P49642 MRPS36P4-201ENST00000534436 298 ntBASIC6.65□□□□□ -1.34
PRIM1P49642 ASB8-204ENST00000536071 568 ntTSL 4 BASIC6.65□□□□□ -1.34
PRIM1P49642 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC6.65□□□□□ -1.34
PRIM1P49642 MIR4284-201ENST00000578924 81 ntBASIC6.65□□□□□ -1.34
PRIM1P49642 AC123786.2-201ENST00000603459 275 ntBASIC6.65□□□□□ -1.34
PRIM1P49642 AP001485.1-201ENST00000604799 199 ntBASIC6.65□□□□□ -1.34
PRIM1P49642 AL121917.1-203ENST00000605534 577 ntBASIC6.65□□□□□ -1.34
PRIM1P49642 AC007619.2-201ENST00000605743 379 ntBASIC6.65□□□□□ -1.34
PRIM1P49642 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
PRIM1P49642 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
PRIM1P49642 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
PRIM1P49642 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
PRIM1P49642 AL359893.1-201ENST00000447628 1580 ntBASIC6.65□□□□□ -1.35
PRIM1P49642 SAMMSON-226ENST00000642089 1582 ntBASIC6.65□□□□□ -1.35
PRIM1P49642 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
PRIM1P49642 HSPA8P1-201ENST00000425843 1833 ntBASIC6.64□□□□□ -1.35
PRIM1P49642 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
PRIM1P49642 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PRIM1P49642 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PRIM1P49642 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.64□□□□□ -1.35
PRIM1P49642 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
PRIM1P49642 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
PRIM1P49642 RN7SKP186-201ENST00000365371 303 ntBASIC6.64□□□□□ -1.35
PRIM1P49642 Y_RNA.458-201ENST00000384240 102 ntBASIC6.64□□□□□ -1.35
PRIM1P49642 RNA5SP187-201ENST00000384400 119 ntBASIC6.64□□□□□ -1.35
PRIM1P49642 RNU6-607P-201ENST00000411283 108 ntBASIC6.64□□□□□ -1.35
PRIM1P49642 GPS2P1-201ENST00000411761 986 ntBASIC6.64□□□□□ -1.35
PRIM1P49642 RPS15AP40-201ENST00000419621 391 ntBASIC6.64□□□□□ -1.35
PRIM1P49642 RPL23AP25-201ENST00000430973 463 ntBASIC6.64□□□□□ -1.35
PRIM1P49642 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC6.64□□□□□ -1.35
PRIM1P49642 RPS29P26-201ENST00000477483 171 ntBASIC6.64□□□□□ -1.35
PRIM1P49642 AC008958.1-201ENST00000511047 682 ntBASIC6.64□□□□□ -1.35
PRIM1P49642 AC074250.1-201ENST00000511117 192 ntBASIC6.64□□□□□ -1.35
PRIM1P49642 AC113155.1-201ENST00000511141 769 ntBASIC6.64□□□□□ -1.35
PRIM1P49642 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC6.64□□□□□ -1.35
PRIM1P49642 SERF1AP1-201ENST00000514575 187 ntBASIC6.64□□□□□ -1.35
PRIM1P49642 SNORA70.11-201ENST00000515987 138 ntBASIC6.64□□□□□ -1.35
PRIM1P49642 SNORA70.13-201ENST00000516116 138 ntBASIC6.64□□□□□ -1.35
PRIM1P49642 RN7SKP258-201ENST00000517151 304 ntBASIC6.64□□□□□ -1.35
PRIM1P49642 IGKV1-32-201ENST00000519290 311 ntBASIC6.64□□□□□ -1.35
PRIM1P49642 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC6.64□□□□□ -1.35
PRIM1P49642 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC6.64□□□□□ -1.35
PRIM1P49642 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC6.64□□□□□ -1.35
PRIM1P49642 PARP1P2-201ENST00000556806 195 ntBASIC6.64□□□□□ -1.35
PRIM1P49642 BDH2P1-201ENST00000602288 736 ntBASIC6.64□□□□□ -1.35
PRIM1P49642 AP000787.2-201ENST00000604432 568 ntBASIC6.64□□□□□ -1.35
PRIM1P49642 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC6.64□□□□□ -1.35
PRIM1P49642 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC6.64□□□□□ -1.35
PRIM1P49642 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
PRIM1P49642 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.64□□□□□ -1.35
PRIM1P49642 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PRIM1P49642 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PRIM1P49642 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
PRIM1P49642 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.63□□□□□ -1.35
PRIM1P49642 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PRIM1P49642 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PRIM1P49642 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC6.63□□□□□ -1.35
PRIM1P49642 snoU2_19.2-201ENST00000363024 80 ntBASIC6.63□□□□□ -1.35
PRIM1P49642 RNU6-704P-201ENST00000364162 103 ntBASIC6.63□□□□□ -1.35
PRIM1P49642 SNORA70.2-201ENST00000364506 135 ntBASIC6.63□□□□□ -1.35
PRIM1P49642 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PRIM1P49642 RNU6-1027P-201ENST00000383998 107 ntBASIC6.63□□□□□ -1.35
PRIM1P49642 SNORD73A-201ENST00000386062 65 ntBASIC6.63□□□□□ -1.35
PRIM1P49642 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
PRIM1P49642 RNU6-821P-201ENST00000390995 107 ntBASIC6.63□□□□□ -1.35
PRIM1P49642 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC6.63□□□□□ -1.35
PRIM1P49642 AF186996.5-201ENST00000418098 904 ntBASIC6.63□□□□□ -1.35
PRIM1P49642 ST7-212ENST00000422922 1887 ntTSL 5 BASIC6.63□□□□□ -1.35
PRIM1P49642 BX323845.1-201ENST00000432417 179 ntBASIC6.63□□□□□ -1.35
PRIM1P49642 AL591043.1-201ENST00000432461 424 ntBASIC6.63□□□□□ -1.35
PRIM1P49642 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC6.63□□□□□ -1.35
PRIM1P49642 IGHV5-78-201ENST00000450948 295 ntBASIC6.63□□□□□ -1.35
PRIM1P49642 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PRIM1P49642 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PRIM1P49642 BCORP1-203ENST00000513194 5093 ntBASIC6.63□□□□□ -1.35
PRIM1P49642 RNU6-1278P-201ENST00000516130 107 ntBASIC6.63□□□□□ -1.35
PRIM1P49642 MIR2355-201ENST00000517199 87 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms