Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.41□□□□□ -2.02
RFC3P40938 HMGB1P28-201ENST00000507778 552 ntBASIC2.41□□□□□ -2.02
RFC3P40938 AC093677.1-201ENST00000514414 678 ntBASIC2.41□□□□□ -2.02
RFC3P40938 SCARNA15.2-201ENST00000516409 127 ntBASIC2.41□□□□□ -2.02
RFC3P40938 RNU6-528P-201ENST00000516926 100 ntBASIC2.41□□□□□ -2.02
RFC3P40938 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.41□□□□□ -2.02
RFC3P40938 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
RFC3P40938 MIR5194-201ENST00000582634 120 ntBASIC2.41□□□□□ -2.02
RFC3P40938 VN1R78P-201ENST00000597393 564 ntBASIC2.41□□□□□ -2.02
RFC3P40938 AL390208.1-201ENST00000605885 644 ntBASIC2.41□□□□□ -2.02
RFC3P40938 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.41□□□□□ -2.02
RFC3P40938 AC243829.7-201ENST00000633081 225 ntBASIC2.41□□□□□ -2.02
RFC3P40938 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.41□□□□□ -2.02
RFC3P40938 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.41□□□□□ -2.02
RFC3P40938 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.41□□□□□ -2.02
RFC3P40938 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
RFC3P40938 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
RFC3P40938 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
RFC3P40938 AL359693.1-201ENST00000614959 2407 ntBASIC2.41□□□□□ -2.02
RFC3P40938 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
RFC3P40938 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
RFC3P40938 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
RFC3P40938 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
RFC3P40938 RNU6-1180P-201ENST00000364935 107 ntBASIC2.4□□□□□ -2.03
RFC3P40938 SNORA36C-201ENST00000384289 132 ntBASIC2.4□□□□□ -2.03
RFC3P40938 MIR514A1-201ENST00000385133 98 ntBASIC2.4□□□□□ -2.03
RFC3P40938 AL161449.1-201ENST00000414531 1199 ntBASIC2.4□□□□□ -2.03
RFC3P40938 AC019070.1-201ENST00000415008 1024 ntBASIC2.4□□□□□ -2.03
RFC3P40938 SPA17P1-201ENST00000416656 452 ntBASIC2.4□□□□□ -2.03
RFC3P40938 MTND4P3-201ENST00000417829 541 ntBASIC2.4□□□□□ -2.03
RFC3P40938 AC018630.2-202ENST00000422992 927 ntBASIC2.4□□□□□ -2.03
RFC3P40938 PPP1R11P2-201ENST00000423543 382 ntBASIC2.4□□□□□ -2.03
RFC3P40938 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.4□□□□□ -2.03
RFC3P40938 EEF1B2P7-201ENST00000451177 676 ntBASIC2.4□□□□□ -2.03
RFC3P40938 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
RFC3P40938 RPS27P26-201ENST00000494583 239 ntBASIC2.4□□□□□ -2.03
RFC3P40938 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.4□□□□□ -2.03
RFC3P40938 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC2.4□□□□□ -2.03
RFC3P40938 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.4□□□□□ -2.03
RFC3P40938 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.4□□□□□ -2.03
RFC3P40938 AC026241.1-201ENST00000517873 2142 ntBASIC2.4□□□□□ -2.03
RFC3P40938 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.4□□□□□ -2.03
RFC3P40938 AC027176.1-201ENST00000560204 514 ntBASIC2.4□□□□□ -2.03
RFC3P40938 AC009097.3-201ENST00000563557 1018 ntBASIC2.4□□□□□ -2.03
RFC3P40938 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.4□□□□□ -2.03
RFC3P40938 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.4□□□□□ -2.03
RFC3P40938 AC068313.1-201ENST00000604028 1008 ntBASIC2.4□□□□□ -2.03
RFC3P40938 AC004067.1-201ENST00000608733 700 ntBASIC2.4□□□□□ -2.03
RFC3P40938 AC004852.3-201ENST00000614131 326 ntBASIC2.4□□□□□ -2.03
RFC3P40938 AL590099.1-201ENST00000615276 138 ntBASIC2.4□□□□□ -2.03
RFC3P40938 AC140725.3-201ENST00000616193 880 ntBASIC2.4□□□□□ -2.03
RFC3P40938 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.4□□□□□ -2.03
RFC3P40938 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.4□□□□□ -2.03
RFC3P40938 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
RFC3P40938 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.4□□□□□ -2.03
RFC3P40938 SDAD1P2-201ENST00000441308 2028 ntBASIC2.4□□□□□ -2.03
RFC3P40938 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
RFC3P40938 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
RFC3P40938 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
RFC3P40938 AL355596.1-201ENST00000565399 3996 ntBASIC2.39□□□□□ -2.03
RFC3P40938 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.39□□□□□ -2.03
RFC3P40938 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
RFC3P40938 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
RFC3P40938 MIR6073-201ENST00000352083 89 ntBASIC2.39□□□□□ -2.03
RFC3P40938 RNU6-28P-201ENST00000362378 107 ntBASIC2.39□□□□□ -2.03
RFC3P40938 RNU1-105P-201ENST00000363470 161 ntBASIC2.39□□□□□ -2.03
RFC3P40938 XGY1-201ENST00000381172 446 ntBASIC2.39□□□□□ -2.03
RFC3P40938 Z85995.1-201ENST00000415547 335 ntBASIC2.39□□□□□ -2.03
RFC3P40938 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.39□□□□□ -2.03
RFC3P40938 MRPS36P1-201ENST00000421291 307 ntBASIC2.39□□□□□ -2.03
RFC3P40938 PTP4A1P7-201ENST00000423476 514 ntBASIC2.39□□□□□ -2.03
RFC3P40938 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC2.39□□□□□ -2.03
RFC3P40938 AC009414.1-201ENST00000427200 443 ntBASIC2.39□□□□□ -2.03
RFC3P40938 AL512844.2-201ENST00000433990 593 ntBASIC2.39□□□□□ -2.03
RFC3P40938 MTND4P6-201ENST00000438297 472 ntBASIC2.39□□□□□ -2.03
RFC3P40938 ST13P20-201ENST00000447996 1065 ntBASIC2.39□□□□□ -2.03
RFC3P40938 AC008427.1-201ENST00000503102 655 ntBASIC2.39□□□□□ -2.03
RFC3P40938 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.39□□□□□ -2.03
RFC3P40938 TTC39CP1-201ENST00000512513 755 ntBASIC2.39□□□□□ -2.03
RFC3P40938 AC112198.4-201ENST00000515450 351 ntBASIC2.39□□□□□ -2.03
RFC3P40938 RNU6-467P-201ENST00000517027 110 ntBASIC2.39□□□□□ -2.03
RFC3P40938 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.39□□□□□ -2.03
RFC3P40938 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.39□□□□□ -2.03
RFC3P40938 AC124947.2-202ENST00000552735 133 ntBASIC2.39□□□□□ -2.03
RFC3P40938 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.39□□□□□ -2.03
RFC3P40938 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.39□□□□□ -2.03
RFC3P40938 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.39□□□□□ -2.03
RFC3P40938 AC090888.1-201ENST00000561335 1141 ntBASIC2.39□□□□□ -2.03
RFC3P40938 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.39□□□□□ -2.03
RFC3P40938 MIR4435-1-201ENST00000582552 80 ntBASIC2.39□□□□□ -2.03
RFC3P40938 MIR3605-201ENST00000583214 100 ntBASIC2.39□□□□□ -2.03
RFC3P40938 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.39□□□□□ -2.03
RFC3P40938 AC011451.2-201ENST00000604303 598 ntBASIC2.39□□□□□ -2.03
RFC3P40938 AL136363.1-201ENST00000605349 337 ntBASIC2.39□□□□□ -2.03
RFC3P40938 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.39□□□□□ -2.03
RFC3P40938 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.39□□□□□ -2.03
RFC3P40938 AC002550.2-201ENST00000621246 394 ntBASIC2.39□□□□□ -2.03
RFC3P40938 AC073308.1-201ENST00000623696 305 ntBASIC2.39□□□□□ -2.03
RFC3P40938 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.39□□□□□ -2.03
RFC3P40938 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms