Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
CPS1P31327 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CPS1P31327 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.91□□□□□ -2.1
CPS1P31327 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.91□□□□□ -2.1
CPS1P31327 SEM1P1-201ENST00000506694 209 ntBASIC1.91□□□□□ -2.1
CPS1P31327 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.91□□□□□ -2.1
CPS1P31327 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.91□□□□□ -2.1
CPS1P31327 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC1.91□□□□□ -2.1
CPS1P31327 AC121761.2-201ENST00000617300 689 ntBASIC1.91□□□□□ -2.1
CPS1P31327 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.91□□□□□ -2.1
CPS1P31327 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CPS1P31327 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC1.91□□□□□ -2.1
CPS1P31327 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.91□□□□□ -2.1
CPS1P31327 RNU6-461P-201ENST00000364195 107 ntBASIC1.91□□□□□ -2.1
CPS1P31327 RPS6P14-201ENST00000425165 719 ntBASIC1.91□□□□□ -2.1
CPS1P31327 AC234781.2-201ENST00000426370 994 ntBASIC1.91□□□□□ -2.1
CPS1P31327 AL512661.1-201ENST00000434586 1253 ntBASIC1.91□□□□□ -2.1
CPS1P31327 HSFY3P-201ENST00000444242 1191 ntBASIC1.91□□□□□ -2.1
CPS1P31327 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.91□□□□□ -2.1
CPS1P31327 AL583843.1-201ENST00000456070 346 ntBASIC1.91□□□□□ -2.1
CPS1P31327 SUMO2P6-201ENST00000505273 288 ntBASIC1.91□□□□□ -2.1
CPS1P31327 RNA5SP436-201ENST00000516020 115 ntBASIC1.91□□□□□ -2.1
CPS1P31327 Y_RNA.675-201ENST00000516389 149 ntBASIC1.91□□□□□ -2.1
CPS1P31327 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.91□□□□□ -2.1
CPS1P31327 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC1.91□□□□□ -2.1
CPS1P31327 SMARCE1P4-201ENST00000523647 241 ntBASIC1.91□□□□□ -2.1
CPS1P31327 CR383656.8-201ENST00000549046 145 ntBASIC1.91□□□□□ -2.1
CPS1P31327 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.91□□□□□ -2.1
CPS1P31327 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.91□□□□□ -2.1
CPS1P31327 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.91□□□□□ -2.1
CPS1P31327 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.91□□□□□ -2.1
CPS1P31327 RBBP8P1-201ENST00000449447 1844 ntBASIC1.9□□□□□ -2.1
CPS1P31327 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.9□□□□□ -2.1
CPS1P31327 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.9□□□□□ -2.11
CPS1P31327 SNORD56.5-201ENST00000364281 72 ntBASIC1.9□□□□□ -2.11
CPS1P31327 RNA5SP189-201ENST00000364920 115 ntBASIC1.9□□□□□ -2.11
CPS1P31327 RNU6-1105P-201ENST00000384774 107 ntBASIC1.9□□□□□ -2.11
CPS1P31327 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
CPS1P31327 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.9□□□□□ -2.11
CPS1P31327 BMI1P1-201ENST00000445879 941 ntBASIC1.9□□□□□ -2.11
CPS1P31327 COX6CP12-201ENST00000446748 202 ntBASIC1.9□□□□□ -2.11
CPS1P31327 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC1.9□□□□□ -2.11
CPS1P31327 AP000907.2-201ENST00000530827 353 ntBASIC1.9□□□□□ -2.11
CPS1P31327 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.9□□□□□ -2.11
CPS1P31327 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.9□□□□□ -2.11
CPS1P31327 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.9□□□□□ -2.11
CPS1P31327 AP001180.3-201ENST00000582221 145 ntBASIC1.9□□□□□ -2.11
CPS1P31327 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.9□□□□□ -2.11
CPS1P31327 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.9□□□□□ -2.11
CPS1P31327 RNU1-133P-201ENST00000364867 167 ntBASIC1.89□□□□□ -2.11
CPS1P31327 AL445183.3-201ENST00000414168 502 ntBASIC1.89□□□□□ -2.11
CPS1P31327 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.89□□□□□ -2.11
CPS1P31327 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.89□□□□□ -2.11
CPS1P31327 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC1.89□□□□□ -2.11
CPS1P31327 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CPS1P31327 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.89□□□□□ -2.11
CPS1P31327 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.89□□□□□ -2.11
CPS1P31327 RN7SKP34-201ENST00000516142 244 ntBASIC1.89□□□□□ -2.11
CPS1P31327 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.89□□□□□ -2.11
CPS1P31327 MIR3122-201ENST00000577243 73 ntBASIC1.89□□□□□ -2.11
CPS1P31327 MIR6840-201ENST00000611937 71 ntBASIC1.89□□□□□ -2.11
CPS1P31327 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
CPS1P31327 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.88□□□□□ -2.11
CPS1P31327 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.88□□□□□ -2.11
CPS1P31327 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CPS1P31327 RNY1P4-201ENST00000384595 115 ntBASIC1.88□□□□□ -2.11
CPS1P31327 RNU6-882P-201ENST00000391025 103 ntBASIC1.88□□□□□ -2.11
CPS1P31327 RPL31P2-201ENST00000413849 377 ntBASIC1.88□□□□□ -2.11
CPS1P31327 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC1.88□□□□□ -2.11
CPS1P31327 HMGN2P13-201ENST00000476476 274 ntBASIC1.88□□□□□ -2.11
CPS1P31327 OR5AQ1P-201ENST00000527596 927 ntBASIC1.88□□□□□ -2.11
CPS1P31327 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.88□□□□□ -2.11
CPS1P31327 MIR5000-201ENST00000577717 103 ntBASIC1.88□□□□□ -2.11
CPS1P31327 DUXAP4-201ENST00000603046 613 ntBASIC1.88□□□□□ -2.11
CPS1P31327 AL135786.2-201ENST00000608422 615 ntBASIC1.88□□□□□ -2.11
CPS1P31327 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
CPS1P31327 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CPS1P31327 FO393413.1-201ENST00000402892 195 ntBASIC1.87□□□□□ -2.11
CPS1P31327 AL033519.2-201ENST00000403958 392 ntBASIC1.87□□□□□ -2.11
CPS1P31327 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC1.87□□□□□ -2.11
CPS1P31327 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.87□□□□□ -2.11
CPS1P31327 UBBP3-201ENST00000445497 241 ntBASIC1.87□□□□□ -2.11
CPS1P31327 Z96811.1-201ENST00000445880 108 ntBASIC1.87□□□□□ -2.11
CPS1P31327 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.87□□□□□ -2.11
CPS1P31327 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.87□□□□□ -2.11
CPS1P31327 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC1.87□□□□□ -2.11
CPS1P31327 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.87□□□□□ -2.11
CPS1P31327 SSXP4-201ENST00000451349 245 ntBASIC1.86□□□□□ -2.11
CPS1P31327 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CPS1P31327 AC006499.2-201ENST00000513470 337 ntBASIC1.86□□□□□ -2.11
CPS1P31327 RNA5SP61-201ENST00000516453 100 ntBASIC1.86□□□□□ -2.11
CPS1P31327 AC125611.2-201ENST00000551907 647 ntBASIC1.86□□□□□ -2.11
CPS1P31327 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CPS1P31327 AC140725.3-201ENST00000616193 880 ntBASIC1.86□□□□□ -2.11
CPS1P31327 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.86□□□□□ -2.11
CPS1P31327 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1.86□□□□□ -2.11
CPS1P31327 SNRPGP13-201ENST00000442212 177 ntBASIC1.86□□□□□ -2.11
CPS1P31327 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CPS1P31327 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
CPS1P31327 AC087854.1-201ENST00000519706 414 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms