Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.7□□□□□ -1.82
TM4SF1P30408 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.7□□□□□ -1.82
TM4SF1P30408 AL121890.1-201ENST00000435457 205 ntBASIC3.7□□□□□ -1.82
TM4SF1P30408 FAM103A2P-201ENST00000444122 354 ntBASIC3.7□□□□□ -1.82
TM4SF1P30408 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.7□□□□□ -1.82
TM4SF1P30408 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.7□□□□□ -1.82
TM4SF1P30408 RN7SL20P-201ENST00000488827 297 ntBASIC3.7□□□□□ -1.82
TM4SF1P30408 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.7□□□□□ -1.82
TM4SF1P30408 AC068305.1-201ENST00000497406 726 ntBASIC3.7□□□□□ -1.82
TM4SF1P30408 AC111000.2-201ENST00000507775 550 ntBASIC3.7□□□□□ -1.82
TM4SF1P30408 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.7□□□□□ -1.82
TM4SF1P30408 SNORA70.14-201ENST00000516205 110 ntBASIC3.7□□□□□ -1.82
TM4SF1P30408 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.7□□□□□ -1.82
TM4SF1P30408 ERHP1-201ENST00000523006 310 ntBASIC3.7□□□□□ -1.82
TM4SF1P30408 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.7□□□□□ -1.82
TM4SF1P30408 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.7□□□□□ -1.82
TM4SF1P30408 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.7□□□□□ -1.82
TM4SF1P30408 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.7□□□□□ -1.82
TM4SF1P30408 MIR3921-201ENST00000577308 85 ntBASIC3.7□□□□□ -1.82
TM4SF1P30408 AC091965.4-201ENST00000607691 587 ntBASIC3.7□□□□□ -1.82
TM4SF1P30408 MIR7844-201ENST00000616161 122 ntBASIC3.7□□□□□ -1.82
TM4SF1P30408 AL356266.1-201ENST00000623311 483 ntBASIC3.7□□□□□ -1.82
TM4SF1P30408 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.7□□□□□ -1.82
TM4SF1P30408 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
TM4SF1P30408 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.7□□□□□ -1.82
TM4SF1P30408 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TM4SF1P30408 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TM4SF1P30408 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TM4SF1P30408 DDX10P1-201ENST00000448545 1933 ntBASIC3.7□□□□□ -1.82
TM4SF1P30408 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TM4SF1P30408 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
TM4SF1P30408 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.69□□□□□ -1.82
TM4SF1P30408 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TM4SF1P30408 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.69□□□□□ -1.82
TM4SF1P30408 RNU6-223P-201ENST00000362830 107 ntBASIC3.69□□□□□ -1.82
TM4SF1P30408 RNU6-553P-201ENST00000364047 96 ntBASIC3.69□□□□□ -1.82
TM4SF1P30408 U3.12-201ENST00000364498 214 ntBASIC3.69□□□□□ -1.82
TM4SF1P30408 RNU6-432P-201ENST00000384196 109 ntBASIC3.69□□□□□ -1.82
TM4SF1P30408 RNU6-769P-201ENST00000384407 104 ntBASIC3.69□□□□□ -1.82
TM4SF1P30408 AP000567.1-201ENST00000406413 156 ntBASIC3.69□□□□□ -1.82
TM4SF1P30408 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.69□□□□□ -1.82
TM4SF1P30408 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.69□□□□□ -1.82
TM4SF1P30408 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.69□□□□□ -1.82
TM4SF1P30408 RPL7L1P10-201ENST00000427790 463 ntBASIC3.69□□□□□ -1.82
TM4SF1P30408 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.69□□□□□ -1.82
TM4SF1P30408 MYL8P-204ENST00000431574 518 ntBASIC3.69□□□□□ -1.82
TM4SF1P30408 MTND1P30-201ENST00000441241 901 ntBASIC3.69□□□□□ -1.82
TM4SF1P30408 RPL7P36-201ENST00000444633 681 ntBASIC3.69□□□□□ -1.82
TM4SF1P30408 SNORD109B-201ENST00000458961 67 ntBASIC3.69□□□□□ -1.82
TM4SF1P30408 SNORD109A-201ENST00000459128 67 ntBASIC3.69□□□□□ -1.82
TM4SF1P30408 RPL23AP41-201ENST00000484754 458 ntBASIC3.69□□□□□ -1.82
TM4SF1P30408 AC005178.1-201ENST00000508392 440 ntBASIC3.69□□□□□ -1.82
TM4SF1P30408 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.69□□□□□ -1.82
TM4SF1P30408 RNU1-143P-201ENST00000516296 146 ntBASIC3.69□□□□□ -1.82
TM4SF1P30408 RNU6-798P-201ENST00000516912 103 ntBASIC3.69□□□□□ -1.82
TM4SF1P30408 MTND2P38-201ENST00000522536 667 ntBASIC3.69□□□□□ -1.82
TM4SF1P30408 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
TM4SF1P30408 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.69□□□□□ -1.82
TM4SF1P30408 MIR4435-1-201ENST00000582552 80 ntBASIC3.69□□□□□ -1.82
TM4SF1P30408 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.69□□□□□ -1.82
TM4SF1P30408 AC024153.1-201ENST00000603103 365 ntBASIC3.69□□□□□ -1.82
TM4SF1P30408 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.69□□□□□ -1.82
TM4SF1P30408 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TM4SF1P30408 U1.23-201ENST00000610293 146 ntBASIC3.69□□□□□ -1.82
TM4SF1P30408 RNU1-68P-201ENST00000615382 146 ntBASIC3.69□□□□□ -1.82
TM4SF1P30408 AL450472.3-201ENST00000615578 367 ntBASIC3.69□□□□□ -1.82
TM4SF1P30408 U1.39-201ENST00000621562 146 ntBASIC3.69□□□□□ -1.82
TM4SF1P30408 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TM4SF1P30408 AC009812.4-201ENST00000569134 1805 ntBASIC3.69□□□□□ -1.82
TM4SF1P30408 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TM4SF1P30408 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.69□□□□□ -1.82
TM4SF1P30408 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TM4SF1P30408 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
TM4SF1P30408 AC092125.1-201ENST00000562568 1995 ntBASIC3.69□□□□□ -1.82
TM4SF1P30408 RNU5A-1-201ENST00000362698 116 ntBASIC3.68□□□□□ -1.82
TM4SF1P30408 Y_RNA.560-201ENST00000384689 102 ntBASIC3.68□□□□□ -1.82
TM4SF1P30408 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.68□□□□□ -1.82
TM4SF1P30408 AC233728.2-201ENST00000425348 757 ntBASIC3.68□□□□□ -1.82
TM4SF1P30408 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.68□□□□□ -1.82
TM4SF1P30408 MTATP6P4-201ENST00000427725 675 ntBASIC3.68□□□□□ -1.82
TM4SF1P30408 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.68□□□□□ -1.82
TM4SF1P30408 RPL37P21-201ENST00000435890 276 ntBASIC3.68□□□□□ -1.82
TM4SF1P30408 AC106872.2-201ENST00000494303 480 ntBASIC3.68□□□□□ -1.82
TM4SF1P30408 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.68□□□□□ -1.82
TM4SF1P30408 RNU6-840P-201ENST00000517275 65 ntBASIC3.68□□□□□ -1.82
TM4SF1P30408 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.68□□□□□ -1.82
TM4SF1P30408 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.68□□□□□ -1.82
TM4SF1P30408 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC3.68□□□□□ -1.82
TM4SF1P30408 AC025946.2-201ENST00000603398 234 ntBASIC3.68□□□□□ -1.82
TM4SF1P30408 AC103710.3-201ENST00000608157 948 ntBASIC3.68□□□□□ -1.82
TM4SF1P30408 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.68□□□□□ -1.82
TM4SF1P30408 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.68□□□□□ -1.82
TM4SF1P30408 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.68□□□□□ -1.82
TM4SF1P30408 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.68□□□□□ -1.82
TM4SF1P30408 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.68□□□□□ -1.82
TM4SF1P30408 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.68□□□□□ -1.82
TM4SF1P30408 AC002546.1-201ENST00000588041 2504 ntBASIC3.68□□□□□ -1.82
TM4SF1P30408 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.68□□□□□ -1.82
TM4SF1P30408 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
TM4SF1P30408 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms