Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SNRPA1P09661 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SNRPA1P09661 MIR448-201ENST00000362131 111 ntBASIC4.49□□□□□ -1.69
SNRPA1P09661 RNU6-97P-201ENST00000363387 104 ntBASIC4.49□□□□□ -1.69
SNRPA1P09661 Y_RNA.160-201ENST00000363677 92 ntBASIC4.49□□□□□ -1.69
SNRPA1P09661 SNORA20.2-201ENST00000383922 131 ntBASIC4.49□□□□□ -1.69
SNRPA1P09661 RNU6-456P-201ENST00000384493 107 ntBASIC4.49□□□□□ -1.69
SNRPA1P09661 AC068050.1-201ENST00000394891 380 ntBASIC4.49□□□□□ -1.69
SNRPA1P09661 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC4.49□□□□□ -1.69
SNRPA1P09661 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC4.49□□□□□ -1.69
SNRPA1P09661 OR1AA1P-201ENST00000419597 916 ntBASIC4.49□□□□□ -1.69
SNRPA1P09661 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.49□□□□□ -1.69
SNRPA1P09661 RPL21P109-201ENST00000422213 475 ntBASIC4.49□□□□□ -1.69
SNRPA1P09661 AC092832.1-201ENST00000422934 400 ntBASIC4.49□□□□□ -1.69
SNRPA1P09661 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.49□□□□□ -1.69
SNRPA1P09661 MTND4P28-201ENST00000426217 387 ntBASIC4.49□□□□□ -1.69
SNRPA1P09661 OR51AB1P-201ENST00000429046 620 ntBASIC4.49□□□□□ -1.69
SNRPA1P09661 AC119618.1-201ENST00000434191 222 ntBASIC4.49□□□□□ -1.69
SNRPA1P09661 RPL7P54-201ENST00000438336 674 ntBASIC4.49□□□□□ -1.69
SNRPA1P09661 AC127537.2-201ENST00000439258 465 ntBASIC4.49□□□□□ -1.69
SNRPA1P09661 AL136380.1-201ENST00000447970 162 ntBASIC4.49□□□□□ -1.69
SNRPA1P09661 RNU6-420P-201ENST00000458780 107 ntBASIC4.49□□□□□ -1.69
SNRPA1P09661 RPS29P25-201ENST00000481709 171 ntBASIC4.49□□□□□ -1.69
SNRPA1P09661 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.49□□□□□ -1.69
SNRPA1P09661 AC079382.1-201ENST00000493346 557 ntBASIC4.49□□□□□ -1.69
SNRPA1P09661 AC091951.2-201ENST00000500762 203 ntBASIC4.49□□□□□ -1.69
SNRPA1P09661 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC4.49□□□□□ -1.69
SNRPA1P09661 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.49□□□□□ -1.69
SNRPA1P09661 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.49□□□□□ -1.69
SNRPA1P09661 AC046134.1-201ENST00000514454 666 ntBASIC4.49□□□□□ -1.69
SNRPA1P09661 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.49□□□□□ -1.69
SNRPA1P09661 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.49□□□□□ -1.69
SNRPA1P09661 RN7SKP57-201ENST00000517248 293 ntBASIC4.49□□□□□ -1.69
SNRPA1P09661 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.49□□□□□ -1.69
SNRPA1P09661 MYL12AP1-201ENST00000518490 515 ntBASIC4.49□□□□□ -1.69
SNRPA1P09661 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.49□□□□□ -1.69
SNRPA1P09661 OR4R3P-201ENST00000525084 838 ntBASIC4.49□□□□□ -1.69
SNRPA1P09661 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.49□□□□□ -1.69
SNRPA1P09661 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.49□□□□□ -1.69
SNRPA1P09661 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.49□□□□□ -1.69
SNRPA1P09661 AC090615.1-201ENST00000577519 154 ntBASIC4.49□□□□□ -1.69
SNRPA1P09661 UBE2L4-201ENST00000587688 464 ntBASIC4.49□□□□□ -1.69
SNRPA1P09661 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.49□□□□□ -1.69
SNRPA1P09661 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.49□□□□□ -1.69
SNRPA1P09661 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.49□□□□□ -1.69
SNRPA1P09661 AL158801.5-201ENST00000623123 465 ntBASIC4.49□□□□□ -1.69
SNRPA1P09661 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.49□□□□□ -1.69
SNRPA1P09661 MTND4P29-201ENST00000503122 1372 ntBASIC4.49□□□□□ -1.69
SNRPA1P09661 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
SNRPA1P09661 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SNRPA1P09661 RNA5SP258-201ENST00000362750 119 ntBASIC4.48□□□□□ -1.69
SNRPA1P09661 RNA5SP42-201ENST00000364278 115 ntBASIC4.48□□□□□ -1.69
SNRPA1P09661 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
SNRPA1P09661 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.48□□□□□ -1.69
SNRPA1P09661 AL160275.2-201ENST00000412010 394 ntBASIC4.48□□□□□ -1.69
SNRPA1P09661 AC127526.1-201ENST00000417526 366 ntBASIC4.48□□□□□ -1.69
SNRPA1P09661 RPS15AP12-201ENST00000419498 388 ntBASIC4.48□□□□□ -1.69
SNRPA1P09661 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.48□□□□□ -1.69
SNRPA1P09661 AC006548.1-201ENST00000427470 102 ntBASIC4.48□□□□□ -1.69
SNRPA1P09661 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.48□□□□□ -1.69
SNRPA1P09661 UBE2V1P7-201ENST00000446395 340 ntBASIC4.48□□□□□ -1.69
SNRPA1P09661 TPT1P14-201ENST00000448018 505 ntBASIC4.48□□□□□ -1.69
SNRPA1P09661 ANP32BP2-201ENST00000454525 545 ntBASIC4.48□□□□□ -1.69
SNRPA1P09661 RN7SL594P-201ENST00000470590 287 ntBASIC4.48□□□□□ -1.69
SNRPA1P09661 BTF3L4P4-201ENST00000506381 449 ntBASIC4.48□□□□□ -1.69
SNRPA1P09661 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.48□□□□□ -1.69
SNRPA1P09661 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.48□□□□□ -1.69
SNRPA1P09661 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.48□□□□□ -1.69
SNRPA1P09661 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.48□□□□□ -1.69
SNRPA1P09661 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.48□□□□□ -1.69
SNRPA1P09661 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.48□□□□□ -1.69
SNRPA1P09661 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC4.48□□□□□ -1.69
SNRPA1P09661 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.48□□□□□ -1.69
SNRPA1P09661 YWHAQP7-201ENST00000603536 658 ntBASIC4.48□□□□□ -1.69
SNRPA1P09661 AC007621.1-201ENST00000604544 437 ntBASIC4.48□□□□□ -1.69
SNRPA1P09661 YPEL5P2-201ENST00000605553 359 ntBASIC4.48□□□□□ -1.69
SNRPA1P09661 AC008945.2-201ENST00000606056 604 ntBASIC4.48□□□□□ -1.69
SNRPA1P09661 AP001330.5-201ENST00000607176 411 ntBASIC4.48□□□□□ -1.69
SNRPA1P09661 AL596245.1-201ENST00000618994 362 ntBASIC4.48□□□□□ -1.69
SNRPA1P09661 CR381572.1-201ENST00000625098 102 ntBASIC4.48□□□□□ -1.69
SNRPA1P09661 AC011978.2-201ENST00000569835 2054 ntBASIC4.48□□□□□ -1.69
SNRPA1P09661 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
SNRPA1P09661 MFSD8-233ENST00000641482 4860 ntBASIC4.48□□□□□ -1.69
SNRPA1P09661 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.48□□□□□ -1.69
SNRPA1P09661 AL645937.1-201ENST00000641739 1652 ntBASIC4.48□□□□□ -1.69
SNRPA1P09661 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SNRPA1P09661 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SNRPA1P09661 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SNRPA1P09661 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.47□□□□□ -1.69
SNRPA1P09661 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SNRPA1P09661 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.47□□□□□ -1.69
SNRPA1P09661 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SNRPA1P09661 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SNRPA1P09661 Y_RNA.548-201ENST00000384656 105 ntBASIC4.47□□□□□ -1.69
SNRPA1P09661 AL356776.1-201ENST00000406574 447 ntBASIC4.47□□□□□ -1.69
SNRPA1P09661 RNU2-41P-201ENST00000410991 178 ntBASIC4.47□□□□□ -1.69
SNRPA1P09661 BX323014.1-201ENST00000412876 237 ntBASIC4.47□□□□□ -1.69
SNRPA1P09661 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.47□□□□□ -1.69
SNRPA1P09661 AC012498.1-201ENST00000424037 437 ntBASIC4.47□□□□□ -1.69
SNRPA1P09661 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms