Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
PDGFAP04085 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
PDGFAP04085 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDGFAP04085 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
PDGFAP04085 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5□□□□□ -1.61
PDGFAP04085 ADAM5-202ENST00000399789 1942 ntBASIC5□□□□□ -1.61
PDGFAP04085 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
PDGFAP04085 RPL9P7-201ENST00000330965 580 ntBASIC5□□□□□ -1.61
PDGFAP04085 RN7SKP104-201ENST00000362605 328 ntBASIC5□□□□□ -1.61
PDGFAP04085 RNU4-50P-201ENST00000364361 141 ntBASIC5□□□□□ -1.61
PDGFAP04085 PPIAP9-201ENST00000403866 498 ntBASIC5□□□□□ -1.61
PDGFAP04085 MIR1302-6-201ENST00000408466 90 ntBASIC5□□□□□ -1.61
PDGFAP04085 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5□□□□□ -1.61
PDGFAP04085 AC007161.1-204ENST00000423039 460 ntBASIC5□□□□□ -1.61
PDGFAP04085 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5□□□□□ -1.61
PDGFAP04085 AL513043.1-201ENST00000439124 535 ntBASIC5□□□□□ -1.61
PDGFAP04085 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5□□□□□ -1.61
PDGFAP04085 RPS3AP46-201ENST00000448352 682 ntBASIC5□□□□□ -1.61
PDGFAP04085 AC009220.1-201ENST00000451614 275 ntBASIC5□□□□□ -1.61
PDGFAP04085 U8.21-201ENST00000459536 136 ntBASIC5□□□□□ -1.61
PDGFAP04085 RPL9P9-202ENST00000466501 579 ntBASIC5□□□□□ -1.61
PDGFAP04085 HMGN2P13-201ENST00000476476 274 ntBASIC5□□□□□ -1.61
PDGFAP04085 IGLV2-34-201ENST00000490007 283 ntBASIC5□□□□□ -1.61
PDGFAP04085 RN7SL346P-201ENST00000491561 294 ntBASIC5□□□□□ -1.61
PDGFAP04085 NDUFB4P9-201ENST00000511646 388 ntBASIC5□□□□□ -1.61
PDGFAP04085 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5□□□□□ -1.61
PDGFAP04085 SNORA31.20-201ENST00000517111 133 ntBASIC5□□□□□ -1.61
PDGFAP04085 IGKV2D-23-201ENST00000518179 286 ntBASIC5□□□□□ -1.61
PDGFAP04085 ATP5F1P5-201ENST00000526403 760 ntBASIC5□□□□□ -1.61
PDGFAP04085 HMGB3P26-201ENST00000560051 582 ntBASIC5□□□□□ -1.61
PDGFAP04085 AP005403.1-201ENST00000579720 229 ntBASIC5□□□□□ -1.61
PDGFAP04085 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC5□□□□□ -1.61
PDGFAP04085 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5□□□□□ -1.61
PDGFAP04085 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5□□□□□ -1.61
PDGFAP04085 uc_338.18-201ENST00000615451 175 ntBASIC5□□□□□ -1.61
PDGFAP04085 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5□□□□□ -1.61
PDGFAP04085 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDGFAP04085 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
PDGFAP04085 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
PDGFAP04085 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
PDGFAP04085 AC083843.3-201ENST00000623679 2186 ntBASIC4.99□□□□□ -1.61
PDGFAP04085 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
PDGFAP04085 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
PDGFAP04085 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDGFAP04085 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PDGFAP04085 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDGFAP04085 RNU6-1317P-201ENST00000364582 104 ntBASIC4.99□□□□□ -1.61
PDGFAP04085 RNU6-472P-201ENST00000384299 107 ntBASIC4.99□□□□□ -1.61
PDGFAP04085 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDGFAP04085 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.99□□□□□ -1.61
PDGFAP04085 RPS12P23-201ENST00000419579 400 ntBASIC4.99□□□□□ -1.61
PDGFAP04085 AC244098.2-201ENST00000422068 99 ntBASIC4.99□□□□□ -1.61
PDGFAP04085 AC093655.2-201ENST00000425735 631 ntBASIC4.99□□□□□ -1.61
PDGFAP04085 TOMM20P4-201ENST00000427861 435 ntBASIC4.99□□□□□ -1.61
PDGFAP04085 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.99□□□□□ -1.61
PDGFAP04085 AC004938.1-201ENST00000438468 308 ntBASIC4.99□□□□□ -1.61
PDGFAP04085 RPS11P7-201ENST00000442125 465 ntBASIC4.99□□□□□ -1.61
PDGFAP04085 H2AFZP5-201ENST00000446960 382 ntBASIC4.99□□□□□ -1.61
PDGFAP04085 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.99□□□□□ -1.61
PDGFAP04085 ABCC13-202ENST00000463099 3842 ntBASIC4.99□□□□□ -1.61
PDGFAP04085 AC092324.1-201ENST00000468671 324 ntBASIC4.99□□□□□ -1.61
PDGFAP04085 RPS20P22-201ENST00000473700 357 ntBASIC4.99□□□□□ -1.61
PDGFAP04085 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.99□□□□□ -1.61
PDGFAP04085 SCARNA15.2-201ENST00000516409 127 ntBASIC4.99□□□□□ -1.61
PDGFAP04085 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.99□□□□□ -1.61
PDGFAP04085 OR5D17P-201ENST00000531492 978 ntBASIC4.99□□□□□ -1.61
PDGFAP04085 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.99□□□□□ -1.61
PDGFAP04085 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.99□□□□□ -1.61
PDGFAP04085 MIR3921-201ENST00000577308 85 ntBASIC4.99□□□□□ -1.61
PDGFAP04085 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.99□□□□□ -1.61
PDGFAP04085 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.99□□□□□ -1.61
PDGFAP04085 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
PDGFAP04085 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.99□□□□□ -1.61
PDGFAP04085 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.99□□□□□ -1.61
PDGFAP04085 AC004805.2-201ENST00000605382 482 ntBASIC4.99□□□□□ -1.61
PDGFAP04085 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.99□□□□□ -1.61
PDGFAP04085 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.99□□□□□ -1.61
PDGFAP04085 AC006023.2-201ENST00000609916 167 ntBASIC4.99□□□□□ -1.61
PDGFAP04085 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDGFAP04085 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
PDGFAP04085 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDGFAP04085 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PDGFAP04085 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
PDGFAP04085 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDGFAP04085 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.98□□□□□ -1.61
PDGFAP04085 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.98□□□□□ -1.61
PDGFAP04085 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDGFAP04085 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PDGFAP04085 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.98□□□□□ -1.61
PDGFAP04085 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDGFAP04085 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.98□□□□□ -1.61
PDGFAP04085 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDGFAP04085 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.98□□□□□ -1.61
PDGFAP04085 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDGFAP04085 ZNF299P-201ENST00000406845 1804 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 NCAPGP1-201ENST00000505112 1814 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC4.98□□□□□ -1.61
PDGFAP04085 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDGFAP04085 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PDGFAP04085 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms