Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 RNU6-1256P-201ENST00000516539 103 ntBASIC2.33□□□□□ -2.04
VAPBO95292 snoZ278.1-201ENST00000517059 112 ntBASIC2.33□□□□□ -2.04
VAPBO95292 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.33□□□□□ -2.04
VAPBO95292 SUB1P1-201ENST00000524415 382 ntBASIC2.33□□□□□ -2.04
VAPBO95292 ATP5F1P5-201ENST00000526403 760 ntBASIC2.33□□□□□ -2.04
VAPBO95292 AP002748.2-201ENST00000528671 348 ntBASIC2.33□□□□□ -2.04
VAPBO95292 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.33□□□□□ -2.04
VAPBO95292 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.33□□□□□ -2.04
VAPBO95292 AC006023.1-201ENST00000603944 259 ntBASIC2.33□□□□□ -2.04
VAPBO95292 AC004853.1-201ENST00000604902 698 ntBASIC2.33□□□□□ -2.04
VAPBO95292 AC080013.4-201ENST00000607624 649 ntBASIC2.33□□□□□ -2.04
VAPBO95292 AL450472.3-201ENST00000615578 367 ntBASIC2.33□□□□□ -2.04
VAPBO95292 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
VAPBO95292 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.33□□□□□ -2.04
VAPBO95292 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.33□□□□□ -2.04
VAPBO95292 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
VAPBO95292 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VAPBO95292 AC007785.2-201ENST00000598627 1916 ntBASIC2.32□□□□□ -2.04
VAPBO95292 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.32□□□□□ -2.04
VAPBO95292 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
VAPBO95292 OR4G2P-202ENST00000641004 1759 ntBASIC2.32□□□□□ -2.04
VAPBO95292 Y_RNA.25-201ENST00000362528 102 ntBASIC2.32□□□□□ -2.04
VAPBO95292 U3.12-201ENST00000364498 214 ntBASIC2.32□□□□□ -2.04
VAPBO95292 SNORA68.1-201ENST00000364537 132 ntBASIC2.32□□□□□ -2.04
VAPBO95292 OR5H15-201ENST00000383696 930 ntBASIC2.32□□□□□ -2.04
VAPBO95292 MIR144-201ENST00000384886 86 ntBASIC2.32□□□□□ -2.04
VAPBO95292 MIR506-201ENST00000384998 124 ntBASIC2.32□□□□□ -2.04
VAPBO95292 MIR514A1-201ENST00000385133 98 ntBASIC2.32□□□□□ -2.04
VAPBO95292 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
VAPBO95292 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.32□□□□□ -2.04
VAPBO95292 AL513475.1-201ENST00000406602 315 ntBASIC2.32□□□□□ -2.04
VAPBO95292 USP9YP27-201ENST00000418455 438 ntBASIC2.32□□□□□ -2.04
VAPBO95292 AC018630.2-202ENST00000422992 927 ntBASIC2.32□□□□□ -2.04
VAPBO95292 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.32□□□□□ -2.04
VAPBO95292 DPRXP1-201ENST00000426312 460 ntBASIC2.32□□□□□ -2.04
VAPBO95292 MTATP6P11-201ENST00000428071 670 ntBASIC2.32□□□□□ -2.04
VAPBO95292 MOB1AP2-201ENST00000446060 614 ntBASIC2.32□□□□□ -2.04
VAPBO95292 DPPA3P1-201ENST00000448050 469 ntBASIC2.32□□□□□ -2.04
VAPBO95292 RN7SL636P-201ENST00000497504 294 ntBASIC2.32□□□□□ -2.04
VAPBO95292 MTCYBP17-201ENST00000503579 789 ntBASIC2.32□□□□□ -2.04
VAPBO95292 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.32□□□□□ -2.04
VAPBO95292 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.32□□□□□ -2.04
VAPBO95292 SCARNA15.2-201ENST00000516409 127 ntBASIC2.32□□□□□ -2.04
VAPBO95292 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.32□□□□□ -2.04
VAPBO95292 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.32□□□□□ -2.04
VAPBO95292 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.32□□□□□ -2.04
VAPBO95292 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.32□□□□□ -2.04
VAPBO95292 AC105137.2-201ENST00000569073 466 ntBASIC2.32□□□□□ -2.04
VAPBO95292 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.32□□□□□ -2.04
VAPBO95292 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
VAPBO95292 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.32□□□□□ -2.04
VAPBO95292 AC098483.2-201ENST00000603158 454 ntBASIC2.32□□□□□ -2.04
VAPBO95292 AC004067.1-201ENST00000608733 700 ntBASIC2.32□□□□□ -2.04
VAPBO95292 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VAPBO95292 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.32□□□□□ -2.04
VAPBO95292 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.32□□□□□ -2.04
VAPBO95292 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.32□□□□□ -2.04
VAPBO95292 AC008443.7-201ENST00000622195 246 ntBASIC2.32□□□□□ -2.04
VAPBO95292 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.32□□□□□ -2.04
VAPBO95292 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
VAPBO95292 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
VAPBO95292 AC007336.1-201ENST00000576365 3828 ntBASIC2.32□□□□□ -2.04
VAPBO95292 Z99496.1-201ENST00000469424 1477 ntBASIC2.32□□□□□ -2.04
VAPBO95292 CCT4P2-201ENST00000233836 1548 ntBASIC2.32□□□□□ -2.04
VAPBO95292 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
VAPBO95292 U3.20-201ENST00000390909 217 ntBASIC2.31□□□□□ -2.04
VAPBO95292 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.31□□□□□ -2.04
VAPBO95292 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.31□□□□□ -2.04
VAPBO95292 FAM204CP-201ENST00000424489 642 ntBASIC2.31□□□□□ -2.04
VAPBO95292 AC007742.1-201ENST00000425789 329 ntBASIC2.31□□□□□ -2.04
VAPBO95292 GTF2IP20-201ENST00000431663 360 ntBASIC2.31□□□□□ -2.04
VAPBO95292 ELOCP26-201ENST00000436067 329 ntBASIC2.31□□□□□ -2.04
VAPBO95292 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.31□□□□□ -2.04
VAPBO95292 Z80107.1-201ENST00000436830 412 ntBASIC2.31□□□□□ -2.04
VAPBO95292 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.31□□□□□ -2.04
VAPBO95292 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.31□□□□□ -2.04
VAPBO95292 MTCYBP11-201ENST00000447254 1109 ntBASIC2.31□□□□□ -2.04
VAPBO95292 AL500527.1-201ENST00000448532 255 ntBASIC2.31□□□□□ -2.04
VAPBO95292 MRPL42P4-201ENST00000453267 443 ntBASIC2.31□□□□□ -2.04
VAPBO95292 AL049873.1-201ENST00000480540 376 ntBASIC2.31□□□□□ -2.04
VAPBO95292 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.31□□□□□ -2.04
VAPBO95292 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.31□□□□□ -2.04
VAPBO95292 RNA5SP24-201ENST00000516478 95 ntBASIC2.31□□□□□ -2.04
VAPBO95292 AC109329.2-201ENST00000519658 482 ntBASIC2.31□□□□□ -2.04
VAPBO95292 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.31□□□□□ -2.04
VAPBO95292 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.31□□□□□ -2.04
VAPBO95292 TRAV28-201ENST00000557548 323 ntBASIC2.31□□□□□ -2.04
VAPBO95292 AL354696.1-201ENST00000614652 497 ntBASIC2.31□□□□□ -2.04
VAPBO95292 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
VAPBO95292 AL160394.1-201ENST00000624765 724 ntBASIC2.31□□□□□ -2.04
VAPBO95292 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.31□□□□□ -2.04
VAPBO95292 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.31□□□□□ -2.04
VAPBO95292 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
VAPBO95292 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
VAPBO95292 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.31□□□□□ -2.04
VAPBO95292 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
VAPBO95292 ZNF720P1-201ENST00000562403 1939 ntBASIC2.3□□□□□ -2.04
VAPBO95292 RPS4XP7-201ENST00000406274 780 ntBASIC2.3□□□□□ -2.04
VAPBO95292 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.3□□□□□ -2.04
VAPBO95292 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms