Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 SNORA11.1-201ENST00000408133 129 ntBASIC3.42□□□□□ -1.86
BEST1O76090 RNU6-920P-201ENST00000410926 92 ntBASIC3.42□□□□□ -1.86
BEST1O76090 RPL17P12-201ENST00000413391 526 ntBASIC3.42□□□□□ -1.86
BEST1O76090 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.42□□□□□ -1.86
BEST1O76090 USP9YP26-201ENST00000421008 661 ntBASIC3.42□□□□□ -1.86
BEST1O76090 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.42□□□□□ -1.86
BEST1O76090 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.42□□□□□ -1.86
BEST1O76090 RPL23AP69-201ENST00000431134 458 ntBASIC3.42□□□□□ -1.86
BEST1O76090 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.42□□□□□ -1.86
BEST1O76090 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
BEST1O76090 AC005094.1-201ENST00000440420 368 ntBASIC3.42□□□□□ -1.86
BEST1O76090 ZNF114P1-201ENST00000453500 292 ntBASIC3.42□□□□□ -1.86
BEST1O76090 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.42□□□□□ -1.86
BEST1O76090 RPS20P22-201ENST00000473700 357 ntBASIC3.42□□□□□ -1.86
BEST1O76090 AC112204.1-201ENST00000502591 103 ntBASIC3.42□□□□□ -1.86
BEST1O76090 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.42□□□□□ -1.86
BEST1O76090 RPF2P2-201ENST00000504693 896 ntBASIC3.42□□□□□ -1.86
BEST1O76090 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.42□□□□□ -1.86
BEST1O76090 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.42□□□□□ -1.86
BEST1O76090 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
BEST1O76090 RNA5SP291-201ENST00000517222 105 ntBASIC3.42□□□□□ -1.86
BEST1O76090 ATP5F1P5-201ENST00000526403 760 ntBASIC3.42□□□□□ -1.86
BEST1O76090 DEFB108A-201ENST00000530110 222 ntBASIC3.42□□□□□ -1.86
BEST1O76090 AC123904.3-201ENST00000547218 814 ntBASIC3.42□□□□□ -1.86
BEST1O76090 AC093012.1-202ENST00000549403 582 ntBASIC3.42□□□□□ -1.86
BEST1O76090 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.42□□□□□ -1.86
BEST1O76090 AL356432.3-201ENST00000568952 465 ntBASIC3.42□□□□□ -1.86
BEST1O76090 MIR3200-201ENST00000580767 85 ntBASIC3.42□□□□□ -1.86
BEST1O76090 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.42□□□□□ -1.86
BEST1O76090 RNVU1-4-201ENST00000612985 164 ntBASIC3.42□□□□□ -1.86
BEST1O76090 SNHG22-203ENST00000617833 660 ntBASIC3.42□□□□□ -1.86
BEST1O76090 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
BEST1O76090 AC026422.1-201ENST00000623961 452 ntBASIC3.42□□□□□ -1.86
BEST1O76090 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.42□□□□□ -1.86
BEST1O76090 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.42□□□□□ -1.86
BEST1O76090 OR5H6-203ENST00000642105 978 ntBASIC3.42□□□□□ -1.86
BEST1O76090 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
BEST1O76090 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
BEST1O76090 AC022336.2-201ENST00000568966 2538 ntBASIC3.42□□□□□ -1.86
BEST1O76090 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
BEST1O76090 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
BEST1O76090 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.41□□□□□ -1.86
BEST1O76090 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
BEST1O76090 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.41□□□□□ -1.86
BEST1O76090 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.41□□□□□ -1.86
BEST1O76090 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.41□□□□□ -1.86
BEST1O76090 Y_RNA.560-201ENST00000384689 102 ntBASIC3.41□□□□□ -1.86
BEST1O76090 RNU6-55P-201ENST00000411092 107 ntBASIC3.41□□□□□ -1.86
BEST1O76090 RNU6-954P-201ENST00000411355 107 ntBASIC3.41□□□□□ -1.86
BEST1O76090 RNA5SP107-201ENST00000411358 122 ntBASIC3.41□□□□□ -1.86
BEST1O76090 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.41□□□□□ -1.86
BEST1O76090 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
BEST1O76090 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.41□□□□□ -1.86
BEST1O76090 AL353777.1-201ENST00000425552 326 ntBASIC3.41□□□□□ -1.86
BEST1O76090 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.41□□□□□ -1.86
BEST1O76090 AL512844.2-201ENST00000433990 593 ntBASIC3.41□□□□□ -1.86
BEST1O76090 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.41□□□□□ -1.86
BEST1O76090 RPL22P17-201ENST00000438729 315 ntBASIC3.41□□□□□ -1.86
BEST1O76090 HMGB3P11-201ENST00000440127 604 ntBASIC3.41□□□□□ -1.86
BEST1O76090 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.41□□□□□ -1.86
BEST1O76090 BMI1P1-201ENST00000445879 941 ntBASIC3.41□□□□□ -1.86
BEST1O76090 AC140076.1-201ENST00000449897 361 ntBASIC3.41□□□□□ -1.86
BEST1O76090 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.41□□□□□ -1.86
BEST1O76090 SETP11-201ENST00000473027 690 ntBASIC3.41□□□□□ -1.86
BEST1O76090 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.41□□□□□ -1.86
BEST1O76090 AC111000.2-201ENST00000507775 550 ntBASIC3.41□□□□□ -1.86
BEST1O76090 OR5BM1P-201ENST00000512021 366 ntBASIC3.41□□□□□ -1.86
BEST1O76090 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.41□□□□□ -1.86
BEST1O76090 RNU6-390P-201ENST00000516259 103 ntBASIC3.41□□□□□ -1.86
BEST1O76090 RN7SKP57-201ENST00000517248 293 ntBASIC3.41□□□□□ -1.86
BEST1O76090 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.41□□□□□ -1.86
BEST1O76090 AC011602.1-201ENST00000546484 331 ntBASIC3.41□□□□□ -1.86
BEST1O76090 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.41□□□□□ -1.86
BEST1O76090 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.41□□□□□ -1.86
BEST1O76090 AC090888.1-201ENST00000561335 1141 ntBASIC3.41□□□□□ -1.86
BEST1O76090 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.41□□□□□ -1.86
BEST1O76090 AMZ2P1-203ENST00000565833 850 ntBASIC3.41□□□□□ -1.86
BEST1O76090 HMGB1P6-201ENST00000569046 646 ntBASIC3.41□□□□□ -1.86
BEST1O76090 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.41□□□□□ -1.86
BEST1O76090 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.41□□□□□ -1.86
BEST1O76090 AC002545.1-201ENST00000592511 181 ntBASIC3.41□□□□□ -1.86
BEST1O76090 KC877982.1-201ENST00000602313 470 ntBASIC3.41□□□□□ -1.86
BEST1O76090 AC245517.5-201ENST00000611529 162 ntBASIC3.41□□□□□ -1.86
BEST1O76090 AC009159.1-201ENST00000618386 642 ntBASIC3.41□□□□□ -1.86
BEST1O76090 AF246928.1-201ENST00000623768 87 ntBASIC3.41□□□□□ -1.86
BEST1O76090 AC120349.3-201ENST00000624377 529 ntBASIC3.41□□□□□ -1.86
BEST1O76090 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.41□□□□□ -1.86
BEST1O76090 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.41□□□□□ -1.86
BEST1O76090 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
BEST1O76090 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
BEST1O76090 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
BEST1O76090 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
BEST1O76090 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
BEST1O76090 RNU5F-6P-201ENST00000362979 116 ntBASIC3.4□□□□□ -1.87
BEST1O76090 RNU6-809P-201ENST00000384461 107 ntBASIC3.4□□□□□ -1.87
BEST1O76090 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
BEST1O76090 SNORD115.1-201ENST00000391109 76 ntBASIC3.4□□□□□ -1.87
BEST1O76090 MRPL50P2-201ENST00000416821 482 ntBASIC3.4□□□□□ -1.87
BEST1O76090 RPL21P40-201ENST00000428586 483 ntBASIC3.4□□□□□ -1.87
BEST1O76090 MED14P1-201ENST00000430517 648 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms