Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 AC007390.1-201ENST00000415722 356 ntBASIC4.31□□□□□ -1.72
CDKL5O76039 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.31□□□□□ -1.72
CDKL5O76039 AL139247.1-201ENST00000422768 325 ntBASIC4.31□□□□□ -1.72
CDKL5O76039 AC006548.1-201ENST00000427470 102 ntBASIC4.31□□□□□ -1.72
CDKL5O76039 RPL7P2-201ENST00000427639 268 ntBASIC4.31□□□□□ -1.72
CDKL5O76039 AL590233.1-201ENST00000430017 456 ntBASIC4.31□□□□□ -1.72
CDKL5O76039 RPL23AP30-201ENST00000432419 501 ntBASIC4.31□□□□□ -1.72
CDKL5O76039 AC119618.1-201ENST00000434191 222 ntBASIC4.31□□□□□ -1.72
CDKL5O76039 CEACAMP4-201ENST00000457676 421 ntBASIC4.31□□□□□ -1.72
CDKL5O76039 AL133162.1-201ENST00000463228 453 ntBASIC4.31□□□□□ -1.72
CDKL5O76039 FTH1P24-201ENST00000503502 462 ntBASIC4.31□□□□□ -1.72
CDKL5O76039 AC010486.1-201ENST00000511793 424 ntBASIC4.31□□□□□ -1.72
CDKL5O76039 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.31□□□□□ -1.72
CDKL5O76039 Y_RNA.675-201ENST00000516389 149 ntBASIC4.31□□□□□ -1.72
CDKL5O76039 RN7SKP21-201ENST00000516503 220 ntBASIC4.31□□□□□ -1.72
CDKL5O76039 IGKV2-23-201ENST00000518729 323 ntBASIC4.31□□□□□ -1.72
CDKL5O76039 AC008489.1-201ENST00000524271 483 ntBASIC4.31□□□□□ -1.72
CDKL5O76039 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.31□□□□□ -1.72
CDKL5O76039 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.31□□□□□ -1.72
CDKL5O76039 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.31□□□□□ -1.72
CDKL5O76039 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.31□□□□□ -1.72
CDKL5O76039 MIR4458-201ENST00000578872 75 ntBASIC4.31□□□□□ -1.72
CDKL5O76039 MIR5685-201ENST00000579080 79 ntBASIC4.31□□□□□ -1.72
CDKL5O76039 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.31□□□□□ -1.72
CDKL5O76039 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.31□□□□□ -1.72
CDKL5O76039 AC079597.1-201ENST00000624306 508 ntBASIC4.31□□□□□ -1.72
CDKL5O76039 CR381572.1-201ENST00000625098 102 ntBASIC4.31□□□□□ -1.72
CDKL5O76039 AC026951.1-201ENST00000559530 2459 ntBASIC4.31□□□□□ -1.72
CDKL5O76039 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDKL5O76039 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.3□□□□□ -1.72
CDKL5O76039 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CDKL5O76039 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDKL5O76039 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDKL5O76039 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDKL5O76039 RPL31P52-201ENST00000407532 367 ntBASIC4.3□□□□□ -1.72
CDKL5O76039 RNU2-9P-201ENST00000410194 145 ntBASIC4.3□□□□□ -1.72
CDKL5O76039 RN7SKP156-201ENST00000410308 342 ntBASIC4.3□□□□□ -1.72
CDKL5O76039 RNU6-1068P-201ENST00000410958 103 ntBASIC4.3□□□□□ -1.72
CDKL5O76039 EEF1A1P40-201ENST00000412883 573 ntBASIC4.3□□□□□ -1.72
CDKL5O76039 PDCL2P1-201ENST00000419302 352 ntBASIC4.3□□□□□ -1.72
CDKL5O76039 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC4.3□□□□□ -1.72
CDKL5O76039 RPS29P7-201ENST00000439662 171 ntBASIC4.3□□□□□ -1.72
CDKL5O76039 AC016691.1-201ENST00000441321 413 ntBASIC4.3□□□□□ -1.72
CDKL5O76039 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.3□□□□□ -1.72
CDKL5O76039 HMGB1P15-201ENST00000453854 435 ntBASIC4.3□□□□□ -1.72
CDKL5O76039 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.3□□□□□ -1.72
CDKL5O76039 snoU13.7-201ENST00000459220 104 ntBASIC4.3□□□□□ -1.72
CDKL5O76039 AC068587.1-201ENST00000483613 781 ntBASIC4.3□□□□□ -1.72
CDKL5O76039 AC093767.1-201ENST00000504523 156 ntBASIC4.3□□□□□ -1.72
CDKL5O76039 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.3□□□□□ -1.72
CDKL5O76039 AC104057.1-201ENST00000515547 497 ntBASIC4.3□□□□□ -1.72
CDKL5O76039 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.3□□□□□ -1.72
CDKL5O76039 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDKL5O76039 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.3□□□□□ -1.72
CDKL5O76039 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.3□□□□□ -1.72
CDKL5O76039 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.3□□□□□ -1.72
CDKL5O76039 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.3□□□□□ -1.72
CDKL5O76039 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CDKL5O76039 HSPE1P5-201ENST00000561489 272 ntBASIC4.3□□□□□ -1.72
CDKL5O76039 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.3□□□□□ -1.72
CDKL5O76039 AC055876.1-202ENST00000567053 138 ntBASIC4.3□□□□□ -1.72
CDKL5O76039 AC053481.3-201ENST00000577881 843 ntBASIC4.3□□□□□ -1.72
CDKL5O76039 AC015917.1-201ENST00000579654 510 ntBASIC4.3□□□□□ -1.72
CDKL5O76039 MIR4795-201ENST00000584182 89 ntBASIC4.3□□□□□ -1.72
CDKL5O76039 UBE2L4-201ENST00000587688 464 ntBASIC4.3□□□□□ -1.72
CDKL5O76039 NF1P5-201ENST00000588287 448 ntBASIC4.3□□□□□ -1.72
CDKL5O76039 AC011712.1-201ENST00000588959 234 ntBASIC4.3□□□□□ -1.72
CDKL5O76039 AC115621.1-201ENST00000604653 858 ntBASIC4.3□□□□□ -1.72
CDKL5O76039 Z84480.1-201ENST00000605131 311 ntBASIC4.3□□□□□ -1.72
CDKL5O76039 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.3□□□□□ -1.72
CDKL5O76039 AC009318.4-201ENST00000620496 486 ntBASIC4.3□□□□□ -1.72
CDKL5O76039 AL158801.5-201ENST00000623123 465 ntBASIC4.3□□□□□ -1.72
CDKL5O76039 AC138649.5-201ENST00000637456 137 ntBASIC4.3□□□□□ -1.72
CDKL5O76039 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.3□□□□□ -1.72
CDKL5O76039 AC097714.1-201ENST00000511272 1647 ntBASIC4.3□□□□□ -1.72
CDKL5O76039 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDKL5O76039 MTND5P28-201ENST00000438005 1594 ntBASIC4.3□□□□□ -1.72
CDKL5O76039 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.3□□□□□ -1.72
CDKL5O76039 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.3□□□□□ -1.72
CDKL5O76039 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDKL5O76039 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDKL5O76039 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDKL5O76039 AL157700.1-201ENST00000561973 1432 ntBASIC4.29□□□□□ -1.72
CDKL5O76039 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDKL5O76039 AL139811.1-201ENST00000424779 2299 ntBASIC4.29□□□□□ -1.72
CDKL5O76039 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CDKL5O76039 RNU6-845P-201ENST00000362578 103 ntBASIC4.29□□□□□ -1.72
CDKL5O76039 RNU6-1120P-201ENST00000362988 108 ntBASIC4.29□□□□□ -1.72
CDKL5O76039 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.29□□□□□ -1.72
CDKL5O76039 RNU6-767P-201ENST00000384132 107 ntBASIC4.29□□□□□ -1.72
CDKL5O76039 RNU6-1207P-201ENST00000384343 107 ntBASIC4.29□□□□□ -1.72
CDKL5O76039 SOD2P1-201ENST00000396543 562 ntBASIC4.29□□□□□ -1.72
CDKL5O76039 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDKL5O76039 SNORA57.3-201ENST00000411095 141 ntBASIC4.29□□□□□ -1.72
CDKL5O76039 RPS20P15-201ENST00000412792 311 ntBASIC4.29□□□□□ -1.72
CDKL5O76039 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.29□□□□□ -1.72
CDKL5O76039 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.29□□□□□ -1.72
CDKL5O76039 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.29□□□□□ -1.72
CDKL5O76039 TAAR7P-201ENST00000436141 242 ntBASIC4.29□□□□□ -1.72
CDKL5O76039 BNIP3P2-201ENST00000441221 577 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms