Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 MIR5685-201ENST00000579080 79 ntBASIC3.76□□□□□ -1.81
CNOT3O75175 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.76□□□□□ -1.81
CNOT3O75175 MIR3146-201ENST00000580367 79 ntBASIC3.76□□□□□ -1.81
CNOT3O75175 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.76□□□□□ -1.81
CNOT3O75175 AC005255.1-201ENST00000593748 216 ntBASIC3.76□□□□□ -1.81
CNOT3O75175 AL117336.2-201ENST00000602435 335 ntBASIC3.76□□□□□ -1.81
CNOT3O75175 YWHAQP7-201ENST00000603536 658 ntBASIC3.76□□□□□ -1.81
CNOT3O75175 AC025449.1-201ENST00000603896 529 ntBASIC3.76□□□□□ -1.81
CNOT3O75175 AL451044.1-201ENST00000604867 238 ntBASIC3.76□□□□□ -1.81
CNOT3O75175 AC103710.3-201ENST00000608157 948 ntBASIC3.76□□□□□ -1.81
CNOT3O75175 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.76□□□□□ -1.81
CNOT3O75175 AL596245.1-201ENST00000618994 362 ntBASIC3.76□□□□□ -1.81
CNOT3O75175 AC010338.1-201ENST00000621823 717 ntBASIC3.76□□□□□ -1.81
CNOT3O75175 AL354798.1-201ENST00000622505 329 ntBASIC3.76□□□□□ -1.81
CNOT3O75175 FP236240.3-201ENST00000623061 327 ntBASIC3.76□□□□□ -1.81
CNOT3O75175 AC034229.5-201ENST00000624258 185 ntBASIC3.76□□□□□ -1.81
CNOT3O75175 AC099654.10-201ENST00000640395 161 ntBASIC3.76□□□□□ -1.81
CNOT3O75175 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.76□□□□□ -1.81
CNOT3O75175 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CNOT3O75175 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CNOT3O75175 AC092326.2-201ENST00000624772 1561 ntBASIC3.76□□□□□ -1.81
CNOT3O75175 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CNOT3O75175 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CNOT3O75175 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
CNOT3O75175 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CNOT3O75175 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CNOT3O75175 AC011460.1-201ENST00000636268 1834 ntBASIC3.75□□□□□ -1.81
CNOT3O75175 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.75□□□□□ -1.81
CNOT3O75175 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CNOT3O75175 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CNOT3O75175 RNA5SP124-201ENST00000362739 110 ntBASIC3.75□□□□□ -1.81
CNOT3O75175 RNU6-1120P-201ENST00000362988 108 ntBASIC3.75□□□□□ -1.81
CNOT3O75175 RNY3P3-201ENST00000363816 102 ntBASIC3.75□□□□□ -1.81
CNOT3O75175 RNA5SP399-201ENST00000364003 117 ntBASIC3.75□□□□□ -1.81
CNOT3O75175 Y_RNA.813-201ENST00000364639 102 ntBASIC3.75□□□□□ -1.81
CNOT3O75175 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
CNOT3O75175 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
CNOT3O75175 MIR124-3-201ENST00000384866 87 ntBASIC3.75□□□□□ -1.81
CNOT3O75175 MIR554-201ENST00000384874 96 ntBASIC3.75□□□□□ -1.81
CNOT3O75175 MT-TD-201ENST00000387419 68 ntBASIC3.75□□□□□ -1.81
CNOT3O75175 SAGE2P-201ENST00000420011 2126 ntBASIC3.75□□□□□ -1.81
CNOT3O75175 SNRPEP10-201ENST00000420249 274 ntBASIC3.75□□□□□ -1.81
CNOT3O75175 AC092832.1-201ENST00000422934 400 ntBASIC3.75□□□□□ -1.81
CNOT3O75175 MTND1P14-201ENST00000427400 950 ntBASIC3.75□□□□□ -1.81
CNOT3O75175 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.75□□□□□ -1.81
CNOT3O75175 ATP5JP1-201ENST00000431631 322 ntBASIC3.75□□□□□ -1.81
CNOT3O75175 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
CNOT3O75175 AC108734.1-201ENST00000439549 399 ntBASIC3.75□□□□□ -1.81
CNOT3O75175 TXNP1-201ENST00000441872 371 ntBASIC3.75□□□□□ -1.81
CNOT3O75175 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.75□□□□□ -1.81
CNOT3O75175 AC022034.3-201ENST00000471393 478 ntBASIC3.75□□□□□ -1.81
CNOT3O75175 AC083798.1-201ENST00000472671 131 ntBASIC3.75□□□□□ -1.81
CNOT3O75175 AC087385.1-201ENST00000475062 312 ntBASIC3.75□□□□□ -1.81
CNOT3O75175 AC055855.1-201ENST00000489563 579 ntBASIC3.75□□□□□ -1.81
CNOT3O75175 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.75□□□□□ -1.81
CNOT3O75175 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.75□□□□□ -1.81
CNOT3O75175 RNA5SP337-201ENST00000517007 109 ntBASIC3.75□□□□□ -1.81
CNOT3O75175 RNA5SP179-201ENST00000517284 121 ntBASIC3.75□□□□□ -1.81
CNOT3O75175 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.75□□□□□ -1.81
CNOT3O75175 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.75□□□□□ -1.81
CNOT3O75175 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.75□□□□□ -1.81
CNOT3O75175 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.75□□□□□ -1.81
CNOT3O75175 UBE2L4-201ENST00000587688 464 ntBASIC3.75□□□□□ -1.81
CNOT3O75175 AC007566.2-201ENST00000603642 413 ntBASIC3.75□□□□□ -1.81
CNOT3O75175 AC091167.4-201ENST00000605079 184 ntBASIC3.75□□□□□ -1.81
CNOT3O75175 AC010680.4-201ENST00000605334 543 ntBASIC3.75□□□□□ -1.81
CNOT3O75175 AC016727.1-205ENST00000605437 569 ntBASIC3.75□□□□□ -1.81
CNOT3O75175 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.75□□□□□ -1.81
CNOT3O75175 AL158801.5-201ENST00000623123 465 ntBASIC3.75□□□□□ -1.81
CNOT3O75175 AC093648.1-201ENST00000623546 606 ntBASIC3.75□□□□□ -1.81
CNOT3O75175 AL359697.1-201ENST00000624879 587 ntBASIC3.75□□□□□ -1.81
CNOT3O75175 AC112200.1-201ENST00000625015 234 ntBASIC3.75□□□□□ -1.81
CNOT3O75175 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.75□□□□□ -1.81
CNOT3O75175 AC024614.3-201ENST00000637860 256 ntBASIC3.75□□□□□ -1.81
CNOT3O75175 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CNOT3O75175 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
CNOT3O75175 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.75□□□□□ -1.81
CNOT3O75175 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CNOT3O75175 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CNOT3O75175 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.75□□□□□ -1.81
CNOT3O75175 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.75□□□□□ -1.81
CNOT3O75175 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.75□□□□□ -1.81
CNOT3O75175 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
CNOT3O75175 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CNOT3O75175 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.74□□□□□ -1.81
CNOT3O75175 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CNOT3O75175 AC011978.2-201ENST00000569835 2054 ntBASIC3.74□□□□□ -1.81
CNOT3O75175 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
CNOT3O75175 RNU6-223P-201ENST00000362830 107 ntBASIC3.74□□□□□ -1.81
CNOT3O75175 RNU6-169P-201ENST00000365336 107 ntBASIC3.74□□□□□ -1.81
CNOT3O75175 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.74□□□□□ -1.81
CNOT3O75175 SNORA69-201ENST00000383895 132 ntBASIC3.74□□□□□ -1.81
CNOT3O75175 MIR23B-201ENST00000384832 97 ntBASIC3.74□□□□□ -1.81
CNOT3O75175 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
CNOT3O75175 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.74□□□□□ -1.81
CNOT3O75175 RPS4XP8-201ENST00000402039 771 ntBASIC3.74□□□□□ -1.81
CNOT3O75175 AL591416.1-201ENST00000404015 867 ntBASIC3.74□□□□□ -1.81
CNOT3O75175 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.74□□□□□ -1.81
CNOT3O75175 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.74□□□□□ -1.81
CNOT3O75175 AC137499.1-201ENST00000427602 88 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 154.6 ms