Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.92□□□□□ -1.94
SDC3O75056 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.92□□□□□ -1.94
SDC3O75056 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.92□□□□□ -1.94
SDC3O75056 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.92□□□□□ -1.94
SDC3O75056 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.92□□□□□ -1.94
SDC3O75056 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
SDC3O75056 CASP1P1-201ENST00000526345 212 ntBASIC2.92□□□□□ -1.94
SDC3O75056 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.92□□□□□ -1.94
SDC3O75056 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
SDC3O75056 AP000867.2-201ENST00000532468 320 ntBASIC2.92□□□□□ -1.94
SDC3O75056 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.92□□□□□ -1.94
SDC3O75056 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.92□□□□□ -1.94
SDC3O75056 AC125611.2-201ENST00000551907 647 ntBASIC2.92□□□□□ -1.94
SDC3O75056 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.92□□□□□ -1.94
SDC3O75056 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.92□□□□□ -1.94
SDC3O75056 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SDC3O75056 CYCSP39-201ENST00000565821 309 ntBASIC2.92□□□□□ -1.94
SDC3O75056 AC136618.2-201ENST00000575091 400 ntBASIC2.92□□□□□ -1.94
SDC3O75056 MIR4319-201ENST00000577285 85 ntBASIC2.92□□□□□ -1.94
SDC3O75056 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.92□□□□□ -1.94
SDC3O75056 AP001429.1-201ENST00000602568 530 ntBASIC2.92□□□□□ -1.94
SDC3O75056 AC022022.2-201ENST00000602989 360 ntBASIC2.92□□□□□ -1.94
SDC3O75056 AL591516.1-201ENST00000611326 274 ntBASIC2.92□□□□□ -1.94
SDC3O75056 AL139418.1-201ENST00000613613 177 ntBASIC2.92□□□□□ -1.94
SDC3O75056 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.92□□□□□ -1.94
SDC3O75056 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.92□□□□□ -1.94
SDC3O75056 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SDC3O75056 TPTE2P4-201ENST00000258589 1605 ntBASIC2.91□□□□□ -1.94
SDC3O75056 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
SDC3O75056 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
SDC3O75056 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.91□□□□□ -1.94
SDC3O75056 RN7SKP266-201ENST00000410232 287 ntBASIC2.91□□□□□ -1.94
SDC3O75056 HIGD1AP15-201ENST00000416198 280 ntBASIC2.91□□□□□ -1.94
SDC3O75056 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.91□□□□□ -1.94
SDC3O75056 AL035407.1-201ENST00000429211 571 ntBASIC2.91□□□□□ -1.94
SDC3O75056 AC105272.1-201ENST00000438604 198 ntBASIC2.91□□□□□ -1.94
SDC3O75056 RPS24P13-201ENST00000442520 397 ntBASIC2.91□□□□□ -1.94
SDC3O75056 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.91□□□□□ -1.94
SDC3O75056 MTND1P9-201ENST00000453775 944 ntBASIC2.91□□□□□ -1.94
SDC3O75056 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.91□□□□□ -1.94
SDC3O75056 RPL30P9-201ENST00000465586 330 ntBASIC2.91□□□□□ -1.94
SDC3O75056 AC083906.5-201ENST00000503722 328 ntBASIC2.91□□□□□ -1.94
SDC3O75056 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
SDC3O75056 AC093809.1-201ENST00000509155 340 ntBASIC2.91□□□□□ -1.94
SDC3O75056 RN7SKP282-201ENST00000516824 299 ntBASIC2.91□□□□□ -1.94
SDC3O75056 RNU6-798P-201ENST00000516912 103 ntBASIC2.91□□□□□ -1.94
SDC3O75056 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.91□□□□□ -1.94
SDC3O75056 AP003497.1-201ENST00000528472 562 ntBASIC2.91□□□□□ -1.94
SDC3O75056 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.91□□□□□ -1.94
SDC3O75056 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.91□□□□□ -1.94
SDC3O75056 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SDC3O75056 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.91□□□□□ -1.94
SDC3O75056 HMGB1P6-201ENST00000569046 646 ntBASIC2.91□□□□□ -1.94
SDC3O75056 MIR3609-201ENST00000582661 80 ntBASIC2.91□□□□□ -1.94
SDC3O75056 GLUD1P4-201ENST00000590914 418 ntBASIC2.91□□□□□ -1.94
SDC3O75056 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.91□□□□□ -1.94
SDC3O75056 NUTF2P8-201ENST00000604593 363 ntBASIC2.91□□□□□ -1.94
SDC3O75056 AC013244.3-201ENST00000605614 388 ntBASIC2.91□□□□□ -1.94
SDC3O75056 AL158211.4-201ENST00000606988 584 ntBASIC2.91□□□□□ -1.94
SDC3O75056 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.91□□□□□ -1.94
SDC3O75056 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.91□□□□□ -1.94
SDC3O75056 AC007318.2-201ENST00000620999 243 ntBASIC2.91□□□□□ -1.94
SDC3O75056 AC073476.4-201ENST00000628409 72 ntBASIC2.91□□□□□ -1.94
SDC3O75056 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
SDC3O75056 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
SDC3O75056 AL136360.1-201ENST00000503377 1900 ntBASIC2.91□□□□□ -1.94
SDC3O75056 AC093010.3-201ENST00000570269 15214 ntBASIC2.91□□□□□ -1.94
SDC3O75056 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SDC3O75056 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SDC3O75056 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.91□□□□□ -1.94
SDC3O75056 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
SDC3O75056 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
SDC3O75056 FTLP6-201ENST00000355274 422 ntBASIC2.9□□□□□ -1.95
SDC3O75056 RNU6-799P-201ENST00000363567 107 ntBASIC2.9□□□□□ -1.95
SDC3O75056 RNU6-289P-201ENST00000364093 107 ntBASIC2.9□□□□□ -1.95
SDC3O75056 RNU6-777P-201ENST00000364265 104 ntBASIC2.9□□□□□ -1.95
SDC3O75056 RNU6-744P-201ENST00000365557 107 ntBASIC2.9□□□□□ -1.95
SDC3O75056 RNU6-76P-201ENST00000384060 104 ntBASIC2.9□□□□□ -1.95
SDC3O75056 RNU6-1316P-201ENST00000384242 108 ntBASIC2.9□□□□□ -1.95
SDC3O75056 RNU6-1207P-201ENST00000384343 107 ntBASIC2.9□□□□□ -1.95
SDC3O75056 RN7SKP58-201ENST00000411010 305 ntBASIC2.9□□□□□ -1.95
SDC3O75056 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.9□□□□□ -1.95
SDC3O75056 AL592148.1-201ENST00000413568 445 ntBASIC2.9□□□□□ -1.95
SDC3O75056 BMS1P22-201ENST00000414726 313 ntBASIC2.9□□□□□ -1.95
SDC3O75056 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.9□□□□□ -1.95
SDC3O75056 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.9□□□□□ -1.95
SDC3O75056 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.9□□□□□ -1.95
SDC3O75056 YWHAZP7-201ENST00000436906 631 ntBASIC2.9□□□□□ -1.95
SDC3O75056 PAXBP1P1-201ENST00000449315 447 ntBASIC2.9□□□□□ -1.95
SDC3O75056 AC021382.1-201ENST00000483523 359 ntBASIC2.9□□□□□ -1.95
SDC3O75056 HMGB1P36-201ENST00000487709 576 ntBASIC2.9□□□□□ -1.95
SDC3O75056 RN7SL20P-201ENST00000488827 297 ntBASIC2.9□□□□□ -1.95
SDC3O75056 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
SDC3O75056 SNORA31.26-201ENST00000517250 137 ntBASIC2.9□□□□□ -1.95
SDC3O75056 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SDC3O75056 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.9□□□□□ -1.95
SDC3O75056 AC087276.1-201ENST00000529659 480 ntBASIC2.9□□□□□ -1.95
SDC3O75056 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.9□□□□□ -1.95
SDC3O75056 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.9□□□□□ -1.95
SDC3O75056 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 217.4 ms