Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.22□□□□□ -2.05
SCN2BO60939 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.22□□□□□ -2.05
SCN2BO60939 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.22□□□□□ -2.05
SCN2BO60939 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.22□□□□□ -2.05
SCN2BO60939 AC087465.1-201ENST00000560574 245 ntBASIC2.22□□□□□ -2.05
SCN2BO60939 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.22□□□□□ -2.05
SCN2BO60939 MIR5694-201ENST00000581190 76 ntBASIC2.22□□□□□ -2.05
SCN2BO60939 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.22□□□□□ -2.05
SCN2BO60939 AC007621.1-201ENST00000604544 437 ntBASIC2.22□□□□□ -2.05
SCN2BO60939 AL161729.4-201ENST00000604650 476 ntBASIC2.22□□□□□ -2.05
SCN2BO60939 AL445493.3-201ENST00000619568 477 ntBASIC2.22□□□□□ -2.05
SCN2BO60939 AL160394.1-201ENST00000624765 724 ntBASIC2.22□□□□□ -2.05
SCN2BO60939 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
SCN2BO60939 AC004944.1-201ENST00000517807 3059 ntBASIC2.21□□□□□ -2.05
SCN2BO60939 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.21□□□□□ -2.06
SCN2BO60939 HMGB1P5-201ENST00000255320 642 ntBASIC2.21□□□□□ -2.06
SCN2BO60939 RNU6-492P-201ENST00000363035 104 ntBASIC2.21□□□□□ -2.06
SCN2BO60939 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.21□□□□□ -2.06
SCN2BO60939 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
SCN2BO60939 OR5H15-201ENST00000383696 930 ntBASIC2.21□□□□□ -2.06
SCN2BO60939 SNORA6-201ENST00000384033 151 ntBASIC2.21□□□□□ -2.06
SCN2BO60939 MIR144-201ENST00000384886 86 ntBASIC2.21□□□□□ -2.06
SCN2BO60939 MIR514A1-201ENST00000385133 98 ntBASIC2.21□□□□□ -2.06
SCN2BO60939 AL031679.1-201ENST00000400616 525 ntBASIC2.21□□□□□ -2.06
SCN2BO60939 AL591416.1-201ENST00000404015 867 ntBASIC2.21□□□□□ -2.06
SCN2BO60939 AC009963.1-201ENST00000417265 157 ntBASIC2.21□□□□□ -2.06
SCN2BO60939 BOLA3P4-201ENST00000418151 400 ntBASIC2.21□□□□□ -2.06
SCN2BO60939 AC018630.2-202ENST00000422992 927 ntBASIC2.21□□□□□ -2.06
SCN2BO60939 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.21□□□□□ -2.06
SCN2BO60939 RAC1P8-201ENST00000427086 527 ntBASIC2.21□□□□□ -2.06
SCN2BO60939 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.21□□□□□ -2.06
SCN2BO60939 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.21□□□□□ -2.06
SCN2BO60939 IPO7P1-201ENST00000442031 636 ntBASIC2.21□□□□□ -2.06
SCN2BO60939 VN1R10P-201ENST00000447106 875 ntBASIC2.21□□□□□ -2.06
SCN2BO60939 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.21□□□□□ -2.06
SCN2BO60939 AC138853.1-201ENST00000503549 823 ntBASIC2.21□□□□□ -2.06
SCN2BO60939 AC091860.1-201ENST00000505723 432 ntBASIC2.21□□□□□ -2.06
SCN2BO60939 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.21□□□□□ -2.06
SCN2BO60939 RNU6-1256P-201ENST00000516539 103 ntBASIC2.21□□□□□ -2.06
SCN2BO60939 SNORA48.10-201ENST00000516965 160 ntBASIC2.21□□□□□ -2.06
SCN2BO60939 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.21□□□□□ -2.06
SCN2BO60939 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.21□□□□□ -2.06
SCN2BO60939 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.21□□□□□ -2.06
SCN2BO60939 RPS3AP23-202ENST00000574601 686 ntBASIC2.21□□□□□ -2.06
SCN2BO60939 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
SCN2BO60939 AP002906.1-201ENST00000603405 233 ntBASIC2.21□□□□□ -2.06
SCN2BO60939 AP003973.1-201ENST00000604639 691 ntBASIC2.21□□□□□ -2.06
SCN2BO60939 MIR6130-201ENST00000619419 109 ntBASIC2.21□□□□□ -2.06
SCN2BO60939 MTND4P27-201ENST00000450813 1354 ntBASIC2.21□□□□□ -2.06
SCN2BO60939 DDX10P1-201ENST00000448545 1933 ntBASIC2.21□□□□□ -2.06
SCN2BO60939 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.2□□□□□ -2.06
SCN2BO60939 MIR16-2-201ENST00000362117 81 ntBASIC2.2□□□□□ -2.06
SCN2BO60939 RNU6-1066P-201ENST00000363573 105 ntBASIC2.2□□□□□ -2.06
SCN2BO60939 SNORD114-30-201ENST00000364448 72 ntBASIC2.2□□□□□ -2.06
SCN2BO60939 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SCN2BO60939 RN7SKP140-201ENST00000411196 284 ntBASIC2.2□□□□□ -2.06
SCN2BO60939 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.2□□□□□ -2.06
SCN2BO60939 AL158050.1-201ENST00000416077 457 ntBASIC2.2□□□□□ -2.06
SCN2BO60939 AC092047.1-201ENST00000424997 240 ntBASIC2.2□□□□□ -2.06
SCN2BO60939 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.2□□□□□ -2.06
SCN2BO60939 IFNA11P-201ENST00000446352 526 ntBASIC2.2□□□□□ -2.06
SCN2BO60939 AL513328.1-201ENST00000446460 224 ntBASIC2.2□□□□□ -2.06
SCN2BO60939 AC126389.1-201ENST00000477436 290 ntBASIC2.2□□□□□ -2.06
SCN2BO60939 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.2□□□□□ -2.06
SCN2BO60939 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.2□□□□□ -2.06
SCN2BO60939 AC022447.1-201ENST00000515358 464 ntBASIC2.2□□□□□ -2.06
SCN2BO60939 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC2.2□□□□□ -2.06
SCN2BO60939 RNA5SP291-201ENST00000517222 105 ntBASIC2.2□□□□□ -2.06
SCN2BO60939 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
SCN2BO60939 AP003066.2-201ENST00000529375 555 ntBASIC2.2□□□□□ -2.06
SCN2BO60939 AP000889.2-201ENST00000532684 490 ntBASIC2.2□□□□□ -2.06
SCN2BO60939 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.2□□□□□ -2.06
SCN2BO60939 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.2□□□□□ -2.06
SCN2BO60939 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.2□□□□□ -2.06
SCN2BO60939 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.2□□□□□ -2.06
SCN2BO60939 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.2□□□□□ -2.06
SCN2BO60939 MIR5007-201ENST00000583098 95 ntBASIC2.2□□□□□ -2.06
SCN2BO60939 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.2□□□□□ -2.06
SCN2BO60939 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.2□□□□□ -2.06
SCN2BO60939 AP001542.1-201ENST00000591314 200 ntBASIC2.2□□□□□ -2.06
SCN2BO60939 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.2□□□□□ -2.06
SCN2BO60939 AC026790.2-201ENST00000606282 430 ntBASIC2.2□□□□□ -2.06
SCN2BO60939 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.2□□□□□ -2.06
SCN2BO60939 AC046143.2-201ENST00000609789 160 ntBASIC2.2□□□□□ -2.06
SCN2BO60939 VN1R74P-201ENST00000613259 503 ntBASIC2.2□□□□□ -2.06
SCN2BO60939 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.2□□□□□ -2.06
SCN2BO60939 MIR4275-201ENST00000636486 87 ntBASIC2.2□□□□□ -2.06
SCN2BO60939 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
SCN2BO60939 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
SCN2BO60939 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
SCN2BO60939 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
SCN2BO60939 AL136360.1-201ENST00000503377 1900 ntBASIC2.19□□□□□ -2.06
SCN2BO60939 ZNF720P1-201ENST00000562403 1939 ntBASIC2.19□□□□□ -2.06
SCN2BO60939 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
SCN2BO60939 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
SCN2BO60939 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SCN2BO60939 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
SCN2BO60939 RNU6-932P-201ENST00000391108 106 ntBASIC2.19□□□□□ -2.06
SCN2BO60939 RPS4XP8-201ENST00000402039 771 ntBASIC2.19□□□□□ -2.06
SCN2BO60939 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms