Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC064862.4-201ENST00000442180 334 ntBASIC6.02□□□□□ -1.45
ACTN4O43707 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC6.02□□□□□ -1.45
ACTN4O43707 EEF1A1P1-201ENST00000447052 739 ntBASIC6.02□□□□□ -1.45
ACTN4O43707 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.02□□□□□ -1.45
ACTN4O43707 RPS15AP34-201ENST00000487776 387 ntBASIC6.02□□□□□ -1.45
ACTN4O43707 OR4H12P-201ENST00000556269 907 ntBASIC6.02□□□□□ -1.45
ACTN4O43707 MIR1273E-201ENST00000581165 102 ntBASIC6.02□□□□□ -1.45
ACTN4O43707 MIR4282-201ENST00000583613 67 ntBASIC6.02□□□□□ -1.45
ACTN4O43707 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC6.02□□□□□ -1.45
ACTN4O43707 AC015982.1-201ENST00000608113 465 ntBASIC6.02□□□□□ -1.45
ACTN4O43707 AC011476.5-201ENST00000615594 130 ntBASIC6.02□□□□□ -1.45
ACTN4O43707 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ACTN4O43707 MIR6839-201ENST00000620425 113 ntBASIC6.02□□□□□ -1.45
ACTN4O43707 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC6.02□□□□□ -1.45
ACTN4O43707 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
ACTN4O43707 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC6.02□□□□□ -1.45
ACTN4O43707 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.02□□□□□ -1.45
ACTN4O43707 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
ACTN4O43707 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.02□□□□□ -1.45
ACTN4O43707 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ACTN4O43707 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
ACTN4O43707 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ACTN4O43707 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ACTN4O43707 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
ACTN4O43707 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
ACTN4O43707 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
ACTN4O43707 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ACTN4O43707 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ACTN4O43707 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
ACTN4O43707 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ACTN4O43707 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.01□□□□□ -1.45
ACTN4O43707 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
ACTN4O43707 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC6.01□□□□□ -1.45
ACTN4O43707 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.01□□□□□ -1.45
ACTN4O43707 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
ACTN4O43707 MIR133B-201ENST00000362210 119 ntBASIC6.01□□□□□ -1.45
ACTN4O43707 Y_RNA.272-201ENST00000364696 102 ntBASIC6.01□□□□□ -1.45
ACTN4O43707 RNU6-215P-201ENST00000365169 102 ntBASIC6.01□□□□□ -1.45
ACTN4O43707 SNORD63-201ENST00000384262 68 ntBASIC6.01□□□□□ -1.45
ACTN4O43707 RNA5SP187-201ENST00000384400 119 ntBASIC6.01□□□□□ -1.45
ACTN4O43707 RNU6-131P-201ENST00000391144 107 ntBASIC6.01□□□□□ -1.45
ACTN4O43707 OR2AT2P-201ENST00000413438 905 ntBASIC6.01□□□□□ -1.45
ACTN4O43707 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC6.01□□□□□ -1.45
ACTN4O43707 TMSB10P2-201ENST00000416049 131 ntBASIC6.01□□□□□ -1.45
ACTN4O43707 AL162725.1-201ENST00000435405 301 ntBASIC6.01□□□□□ -1.45
ACTN4O43707 AC073587.1-201ENST00000447093 876 ntBASIC6.01□□□□□ -1.45
ACTN4O43707 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC6.01□□□□□ -1.45
ACTN4O43707 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC6.01□□□□□ -1.45
ACTN4O43707 RPL23AP65-201ENST00000475608 468 ntBASIC6.01□□□□□ -1.45
ACTN4O43707 RN7SL814P-201ENST00000487715 300 ntBASIC6.01□□□□□ -1.45
ACTN4O43707 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ACTN4O43707 RPS27AP13-201ENST00000498403 237 ntBASIC6.01□□□□□ -1.45
ACTN4O43707 MRPS33P2-201ENST00000507850 322 ntBASIC6.01□□□□□ -1.45
ACTN4O43707 HMGN1P11-201ENST00000508668 303 ntBASIC6.01□□□□□ -1.45
ACTN4O43707 RFPL4AP5-201ENST00000514977 504 ntBASIC6.01□□□□□ -1.45
ACTN4O43707 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC6.01□□□□□ -1.45
ACTN4O43707 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.01□□□□□ -1.45
ACTN4O43707 AC104581.2-201ENST00000572227 430 ntBASIC6.01□□□□□ -1.45
ACTN4O43707 MIR4660-201ENST00000583549 74 ntBASIC6.01□□□□□ -1.45
ACTN4O43707 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC6.01□□□□□ -1.45
ACTN4O43707 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC6.01□□□□□ -1.45
ACTN4O43707 AL355812.1-201ENST00000603215 216 ntBASIC6.01□□□□□ -1.45
ACTN4O43707 AC000068.2-201ENST00000608816 460 ntBASIC6.01□□□□□ -1.45
ACTN4O43707 AC109583.2-201ENST00000617367 129 ntBASIC6.01□□□□□ -1.45
ACTN4O43707 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
ACTN4O43707 MAPK10-328ENST00000641553 4009 ntBASIC6.01□□□□□ -1.45
ACTN4O43707 AC027228.2-201ENST00000567141 2154 ntBASIC6.01□□□□□ -1.45
ACTN4O43707 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
ACTN4O43707 SAGE4P-201ENST00000442271 3381 ntBASIC6.01□□□□□ -1.45
ACTN4O43707 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
ACTN4O43707 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6□□□□□ -1.45
ACTN4O43707 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ACTN4O43707 AL034549.2-201ENST00000618285 3373 ntBASIC6□□□□□ -1.45
ACTN4O43707 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ACTN4O43707 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
ACTN4O43707 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ACTN4O43707 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ACTN4O43707 U3.7-201ENST00000363668 216 ntBASIC6□□□□□ -1.45
ACTN4O43707 Y_RNA.275-201ENST00000364726 110 ntBASIC6□□□□□ -1.45
ACTN4O43707 Y_RNA.353-201ENST00000365440 108 ntBASIC6□□□□□ -1.45
ACTN4O43707 RNU6-44P-201ENST00000384045 107 ntBASIC6□□□□□ -1.45
ACTN4O43707 Y_RNA.441-201ENST00000384123 112 ntBASIC6□□□□□ -1.45
ACTN4O43707 Y_RNA.568-201ENST00000384742 113 ntBASIC6□□□□□ -1.45
ACTN4O43707 CYB5AP4-201ENST00000396692 399 ntBASIC6□□□□□ -1.45
ACTN4O43707 AC092447.6-201ENST00000414578 210 ntBASIC6□□□□□ -1.45
ACTN4O43707 AF186996.5-201ENST00000418098 904 ntBASIC6□□□□□ -1.45
ACTN4O43707 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC6□□□□□ -1.45
ACTN4O43707 AL035461.1-201ENST00000421490 332 ntBASIC6□□□□□ -1.45
ACTN4O43707 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6□□□□□ -1.45
ACTN4O43707 ELOCP18-201ENST00000434209 337 ntBASIC6□□□□□ -1.45
ACTN4O43707 AP000281.1-201ENST00000444036 316 ntBASIC6□□□□□ -1.45
ACTN4O43707 RPL36AP39-201ENST00000445859 318 ntBASIC6□□□□□ -1.45
ACTN4O43707 RPL30P1-201ENST00000488676 339 ntBASIC6□□□□□ -1.45
ACTN4O43707 SCARNA16.4-201ENST00000516956 187 ntBASIC6□□□□□ -1.45
ACTN4O43707 RNA5SP230-201ENST00000517039 122 ntBASIC6□□□□□ -1.45
ACTN4O43707 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6□□□□□ -1.45
ACTN4O43707 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6□□□□□ -1.45
ACTN4O43707 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC6□□□□□ -1.45
ACTN4O43707 FAM60BP-201ENST00000578364 658 ntBASIC6□□□□□ -1.45
ACTN4O43707 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms