Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 AL133241.1-201ENST00000556832 487 ntBASIC3.74□□□□□ -1.81
MSI1O43347 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.74□□□□□ -1.81
MSI1O43347 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.74□□□□□ -1.81
MSI1O43347 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.74□□□□□ -1.81
MSI1O43347 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.74□□□□□ -1.81
MSI1O43347 KC877982.1-201ENST00000602313 470 ntBASIC3.74□□□□□ -1.81
MSI1O43347 AL031176.1-201ENST00000604554 466 ntBASIC3.74□□□□□ -1.81
MSI1O43347 AC006077.1-201ENST00000604746 343 ntBASIC3.74□□□□□ -1.81
MSI1O43347 IGHV3-29-201ENST00000604817 344 ntBASIC3.74□□□□□ -1.81
MSI1O43347 AL136363.1-201ENST00000605349 337 ntBASIC3.74□□□□□ -1.81
MSI1O43347 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
MSI1O43347 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
MSI1O43347 AC244100.1-202ENST00000621554 382 ntBASIC3.74□□□□□ -1.81
MSI1O43347 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.74□□□□□ -1.81
MSI1O43347 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
MSI1O43347 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.74□□□□□ -1.81
MSI1O43347 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.74□□□□□ -1.81
MSI1O43347 AC032011.1-201ENST00000611703 1549 ntBASIC3.74□□□□□ -1.81
MSI1O43347 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.74□□□□□ -1.81
MSI1O43347 AC010733.2-201ENST00000589496 5702 ntBASIC3.73□□□□□ -1.81
MSI1O43347 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
MSI1O43347 MAPK10-372ENST00000641954 3413 ntBASIC3.73□□□□□ -1.81
MSI1O43347 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.73□□□□□ -1.81
MSI1O43347 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.73□□□□□ -1.81
MSI1O43347 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.73□□□□□ -1.81
MSI1O43347 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
MSI1O43347 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
MSI1O43347 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.73□□□□□ -1.81
MSI1O43347 RNU6-1155P-201ENST00000363554 107 ntBASIC3.73□□□□□ -1.81
MSI1O43347 Y_RNA.256-201ENST00000364594 104 ntBASIC3.73□□□□□ -1.81
MSI1O43347 RNY3P13-201ENST00000365542 102 ntBASIC3.73□□□□□ -1.81
MSI1O43347 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
MSI1O43347 Y_RNA.409-201ENST00000383990 98 ntBASIC3.73□□□□□ -1.81
MSI1O43347 MIR449B-201ENST00000384995 97 ntBASIC3.73□□□□□ -1.81
MSI1O43347 RNU6-837P-201ENST00000391056 108 ntBASIC3.73□□□□□ -1.81
MSI1O43347 CIR1P3-201ENST00000405137 479 ntBASIC3.73□□□□□ -1.81
MSI1O43347 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.73□□□□□ -1.81
MSI1O43347 AC093578.1-201ENST00000415219 368 ntBASIC3.73□□□□□ -1.81
MSI1O43347 AC068533.1-201ENST00000418542 415 ntBASIC3.73□□□□□ -1.81
MSI1O43347 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
MSI1O43347 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.73□□□□□ -1.81
MSI1O43347 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.73□□□□□ -1.81
MSI1O43347 AC017083.1-201ENST00000428093 483 ntBASIC3.73□□□□□ -1.81
MSI1O43347 AC002486.1-201ENST00000435098 391 ntBASIC3.73□□□□□ -1.81
MSI1O43347 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.73□□□□□ -1.81
MSI1O43347 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.73□□□□□ -1.81
MSI1O43347 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.73□□□□□ -1.81
MSI1O43347 MTCO2P29-201ENST00000465212 189 ntBASIC3.73□□□□□ -1.81
MSI1O43347 MTCO3P38-201ENST00000468910 766 ntBASIC3.73□□□□□ -1.81
MSI1O43347 AC007182.2-201ENST00000489251 402 ntBASIC3.73□□□□□ -1.81
MSI1O43347 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.73□□□□□ -1.81
MSI1O43347 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.73□□□□□ -1.81
MSI1O43347 AC009646.1-201ENST00000510455 318 ntBASIC3.73□□□□□ -1.81
MSI1O43347 RN7SKP83-201ENST00000516512 178 ntBASIC3.73□□□□□ -1.81
MSI1O43347 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.73□□□□□ -1.81
MSI1O43347 MTCYBP41-201ENST00000528913 1123 ntBASIC3.73□□□□□ -1.81
MSI1O43347 DEFB109D-201ENST00000529497 240 ntBASIC3.73□□□□□ -1.81
MSI1O43347 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.73□□□□□ -1.81
MSI1O43347 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
MSI1O43347 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.73□□□□□ -1.81
MSI1O43347 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.73□□□□□ -1.81
MSI1O43347 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.73□□□□□ -1.81
MSI1O43347 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.73□□□□□ -1.81
MSI1O43347 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.73□□□□□ -1.81
MSI1O43347 AL133153.1-201ENST00000557756 303 ntBASIC3.73□□□□□ -1.81
MSI1O43347 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.73□□□□□ -1.81
MSI1O43347 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.73□□□□□ -1.81
MSI1O43347 KLKP1-201ENST00000595979 403 ntBASIC3.73□□□□□ -1.81
MSI1O43347 AL161756.2-201ENST00000604597 246 ntBASIC3.73□□□□□ -1.81
MSI1O43347 AL158211.4-201ENST00000606988 584 ntBASIC3.73□□□□□ -1.81
MSI1O43347 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.73□□□□□ -1.81
MSI1O43347 AC006338.1-201ENST00000618453 749 ntBASIC3.73□□□□□ -1.81
MSI1O43347 U4.6-201ENST00000621618 127 ntBASIC3.73□□□□□ -1.81
MSI1O43347 AL357559.1-201ENST00000622228 274 ntBASIC3.73□□□□□ -1.81
MSI1O43347 AL645937.1-201ENST00000641739 1652 ntBASIC3.73□□□□□ -1.81
MSI1O43347 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.73□□□□□ -1.81
MSI1O43347 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.73□□□□□ -1.81
MSI1O43347 AL161912.2-201ENST00000565707 3007 ntBASIC3.72□□□□□ -1.81
MSI1O43347 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
MSI1O43347 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
MSI1O43347 OR1S2-201ENST00000302592 978 ntBASIC3.72□□□□□ -1.81
MSI1O43347 Y_RNA.450-201ENST00000384198 113 ntBASIC3.72□□□□□ -1.81
MSI1O43347 AL590002.1-201ENST00000406554 418 ntBASIC3.72□□□□□ -1.81
MSI1O43347 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.72□□□□□ -1.81
MSI1O43347 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.72□□□□□ -1.81
MSI1O43347 RPS7P15-201ENST00000415804 584 ntBASIC3.72□□□□□ -1.81
MSI1O43347 AL353193.1-201ENST00000421444 268 ntBASIC3.72□□□□□ -1.81
MSI1O43347 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
MSI1O43347 AC073063.1-201ENST00000434352 607 ntBASIC3.72□□□□□ -1.81
MSI1O43347 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.72□□□□□ -1.81
MSI1O43347 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.72□□□□□ -1.81
MSI1O43347 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.72□□□□□ -1.81
MSI1O43347 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.72□□□□□ -1.81
MSI1O43347 AC010493.1-201ENST00000513479 292 ntBASIC3.72□□□□□ -1.81
MSI1O43347 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.72□□□□□ -1.81
MSI1O43347 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.72□□□□□ -1.81
MSI1O43347 AC008489.1-201ENST00000524271 483 ntBASIC3.72□□□□□ -1.81
MSI1O43347 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.72□□□□□ -1.81
MSI1O43347 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.72□□□□□ -1.81
MSI1O43347 AP000857.1-201ENST00000532151 543 ntBASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms