Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.7□□□□□ -2.14
SDCBPO00560 AC008568.2-201ENST00000623862 2313 ntBASIC1.69□□□□□ -2.14
SDCBPO00560 SDAD1P2-201ENST00000441308 2028 ntBASIC1.69□□□□□ -2.14
SDCBPO00560 RNU1-105P-201ENST00000363470 161 ntBASIC1.69□□□□□ -2.14
SDCBPO00560 RNU6-657P-201ENST00000383904 107 ntBASIC1.69□□□□□ -2.14
SDCBPO00560 RNU6-481P-201ENST00000384194 107 ntBASIC1.69□□□□□ -2.14
SDCBPO00560 RN7SKP32-201ENST00000410167 303 ntBASIC1.69□□□□□ -2.14
SDCBPO00560 RNA5SP425-201ENST00000410336 112 ntBASIC1.69□□□□□ -2.14
SDCBPO00560 RNA5SP80-201ENST00000410475 111 ntBASIC1.69□□□□□ -2.14
SDCBPO00560 RNU4-27P-201ENST00000410889 139 ntBASIC1.69□□□□□ -2.14
SDCBPO00560 AL136133.1-201ENST00000413694 376 ntBASIC1.69□□□□□ -2.14
SDCBPO00560 RPL27AP8-201ENST00000424277 446 ntBASIC1.69□□□□□ -2.14
SDCBPO00560 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.69□□□□□ -2.14
SDCBPO00560 ZFAND6P1-201ENST00000434138 605 ntBASIC1.69□□□□□ -2.14
SDCBPO00560 AC024082.2-201ENST00000434771 238 ntBASIC1.69□□□□□ -2.14
SDCBPO00560 AC090774.1-201ENST00000435925 246 ntBASIC1.69□□□□□ -2.14
SDCBPO00560 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SDCBPO00560 CBWD4P-201ENST00000445695 655 ntBASIC1.69□□□□□ -2.14
SDCBPO00560 AL050341.1-201ENST00000447743 313 ntBASIC1.69□□□□□ -2.14
SDCBPO00560 HMGN1P5-201ENST00000448591 263 ntBASIC1.69□□□□□ -2.14
SDCBPO00560 AC233279.1-201ENST00000455300 423 ntBASIC1.69□□□□□ -2.14
SDCBPO00560 UBE2DNL-203ENST00000474922 222 ntBASIC1.69□□□□□ -2.14
SDCBPO00560 AL135752.1-201ENST00000479477 471 ntBASIC1.69□□□□□ -2.14
SDCBPO00560 RPL21P47-201ENST00000483696 477 ntBASIC1.69□□□□□ -2.14
SDCBPO00560 AC008427.1-201ENST00000503102 655 ntBASIC1.69□□□□□ -2.14
SDCBPO00560 AC048346.1-201ENST00000510247 144 ntBASIC1.69□□□□□ -2.14
SDCBPO00560 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.69□□□□□ -2.14
SDCBPO00560 COX6CP5-201ENST00000527162 228 ntBASIC1.69□□□□□ -2.14
SDCBPO00560 AL512310.1-201ENST00000548639 172 ntBASIC1.69□□□□□ -2.14
SDCBPO00560 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.69□□□□□ -2.14
SDCBPO00560 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.69□□□□□ -2.14
SDCBPO00560 AC068135.2-201ENST00000569293 1028 ntBASIC1.69□□□□□ -2.14
SDCBPO00560 MIR1273D-201ENST00000577266 86 ntBASIC1.69□□□□□ -2.14
SDCBPO00560 AP001542.1-201ENST00000591314 200 ntBASIC1.69□□□□□ -2.14
SDCBPO00560 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.69□□□□□ -2.14
SDCBPO00560 AP005137.2-201ENST00000609238 400 ntBASIC1.69□□□□□ -2.14
SDCBPO00560 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.69□□□□□ -2.14
SDCBPO00560 AC079395.3-201ENST00000615161 484 ntBASIC1.69□□□□□ -2.14
SDCBPO00560 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
SDCBPO00560 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.69□□□□□ -2.14
SDCBPO00560 MTCO1P23-201ENST00000415223 1526 ntBASIC1.69□□□□□ -2.14
SDCBPO00560 TPTE2P4-201ENST00000258589 1605 ntBASIC1.69□□□□□ -2.14
SDCBPO00560 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.69□□□□□ -2.14
SDCBPO00560 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SDCBPO00560 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SDCBPO00560 PAPPA-AS1-201ENST00000445861 2450 ntBASIC1.68□□□□□ -2.14
SDCBPO00560 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.68□□□□□ -2.14
SDCBPO00560 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.68□□□□□ -2.14
SDCBPO00560 AL022578.1-201ENST00000439330 1433 ntBASIC1.68□□□□□ -2.14
SDCBPO00560 ELF2P3-201ENST00000445099 1506 ntBASIC1.68□□□□□ -2.14
SDCBPO00560 Y_RNA.111-201ENST00000363248 100 ntBASIC1.68□□□□□ -2.14
SDCBPO00560 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.68□□□□□ -2.14
SDCBPO00560 RNU2-15P-201ENST00000410692 191 ntBASIC1.68□□□□□ -2.14
SDCBPO00560 RNU2-40P-201ENST00000410833 196 ntBASIC1.68□□□□□ -2.14
SDCBPO00560 AL139156.1-201ENST00000412785 841 ntBASIC1.68□□□□□ -2.14
SDCBPO00560 AC246680.2-201ENST00000422106 389 ntBASIC1.68□□□□□ -2.14
SDCBPO00560 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.68□□□□□ -2.14
SDCBPO00560 MYL8P-204ENST00000431574 518 ntBASIC1.68□□□□□ -2.14
SDCBPO00560 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.68□□□□□ -2.14
SDCBPO00560 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SDCBPO00560 RPS15AP27-201ENST00000449183 343 ntBASIC1.68□□□□□ -2.14
SDCBPO00560 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.68□□□□□ -2.14
SDCBPO00560 AC092155.2-201ENST00000454675 477 ntBASIC1.68□□□□□ -2.14
SDCBPO00560 CDC42P1-201ENST00000456658 548 ntBASIC1.68□□□□□ -2.14
SDCBPO00560 RNU7-140P-201ENST00000459546 60 ntBASIC1.68□□□□□ -2.14
SDCBPO00560 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.68□□□□□ -2.14
SDCBPO00560 RN7SL274P-201ENST00000492268 272 ntBASIC1.68□□□□□ -2.14
SDCBPO00560 AC022493.1-201ENST00000492984 337 ntBASIC1.68□□□□□ -2.14
SDCBPO00560 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.68□□□□□ -2.14
SDCBPO00560 MTCYBP17-201ENST00000503579 789 ntBASIC1.68□□□□□ -2.14
SDCBPO00560 AC010486.1-201ENST00000511793 424 ntBASIC1.68□□□□□ -2.14
SDCBPO00560 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.68□□□□□ -2.14
SDCBPO00560 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.68□□□□□ -2.14
SDCBPO00560 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.68□□□□□ -2.14
SDCBPO00560 HMGB1P14-201ENST00000557424 591 ntBASIC1.68□□□□□ -2.14
SDCBPO00560 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.68□□□□□ -2.14
SDCBPO00560 SULT1C2P1-202ENST00000562418 459 ntBASIC1.68□□□□□ -2.14
SDCBPO00560 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SDCBPO00560 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.68□□□□□ -2.14
SDCBPO00560 AC040174.2-201ENST00000602701 465 ntBASIC1.68□□□□□ -2.14
SDCBPO00560 AC097504.2-201ENST00000608088 454 ntBASIC1.68□□□□□ -2.14
SDCBPO00560 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.68□□□□□ -2.14
SDCBPO00560 Y_RNA.783-201ENST00000613546 102 ntBASIC1.68□□□□□ -2.14
SDCBPO00560 AC009090.3-201ENST00000616553 565 ntBASIC1.68□□□□□ -2.14
SDCBPO00560 AL590808.1-201ENST00000618696 141 ntBASIC1.68□□□□□ -2.14
SDCBPO00560 AC098657.3-201ENST00000620434 263 ntBASIC1.68□□□□□ -2.14
SDCBPO00560 AL356585.4-201ENST00000623078 1229 ntBASIC1.68□□□□□ -2.14
SDCBPO00560 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SDCBPO00560 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.67□□□□□ -2.14
SDCBPO00560 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.67□□□□□ -2.14
SDCBPO00560 OR5T3-201ENST00000303059 1023 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 RNU6-883P-201ENST00000384597 107 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 SNORA64-201ENST00000384674 134 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 MIR767-201ENST00000390228 109 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 RPL17P50-201ENST00000396131 546 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SDCBPO00560 SUMO2P12-201ENST00000405924 140 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 U3.40-201ENST00000408706 208 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 AL158050.1-201ENST00000416077 457 ntBASIC1.67□□□□□ -2.14
SDCBPO00560 Z98742.3-201ENST00000418637 326 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms