Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.18□□□□□ -2.06
UPK1AO00322 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
UPK1AO00322 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
UPK1AO00322 SNRPEP3-201ENST00000338402 276 ntBASIC2.18□□□□□ -2.06
UPK1AO00322 SNORA63.3-201ENST00000362682 132 ntBASIC2.18□□□□□ -2.06
UPK1AO00322 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.18□□□□□ -2.06
UPK1AO00322 RNA5SP354-201ENST00000391247 136 ntBASIC2.18□□□□□ -2.06
UPK1AO00322 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.18□□□□□ -2.06
UPK1AO00322 AC007742.1-201ENST00000425789 329 ntBASIC2.18□□□□□ -2.06
UPK1AO00322 ELOCP26-201ENST00000436067 329 ntBASIC2.18□□□□□ -2.06
UPK1AO00322 AL031659.1-201ENST00000447075 539 ntBASIC2.18□□□□□ -2.06
UPK1AO00322 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.18□□□□□ -2.06
UPK1AO00322 RPL31P50-201ENST00000471002 296 ntBASIC2.18□□□□□ -2.06
UPK1AO00322 RN7SL636P-201ENST00000497504 294 ntBASIC2.18□□□□□ -2.06
UPK1AO00322 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.18□□□□□ -2.06
UPK1AO00322 GTF2IP9-201ENST00000502460 301 ntBASIC2.18□□□□□ -2.06
UPK1AO00322 AC093801.2-201ENST00000503966 1050 ntBASIC2.18□□□□□ -2.06
UPK1AO00322 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.18□□□□□ -2.06
UPK1AO00322 AC114781.4-201ENST00000513707 639 ntBASIC2.18□□□□□ -2.06
UPK1AO00322 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.18□□□□□ -2.06
UPK1AO00322 AC022861.1-201ENST00000522981 663 ntBASIC2.18□□□□□ -2.06
UPK1AO00322 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
UPK1AO00322 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
UPK1AO00322 AC103810.1-201ENST00000579873 453 ntBASIC2.18□□□□□ -2.06
UPK1AO00322 MIR4637-201ENST00000582405 84 ntBASIC2.18□□□□□ -2.06
UPK1AO00322 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.18□□□□□ -2.06
UPK1AO00322 AC026790.2-201ENST00000606282 430 ntBASIC2.18□□□□□ -2.06
UPK1AO00322 AP000943.4-201ENST00000622912 357 ntBASIC2.18□□□□□ -2.06
UPK1AO00322 AC073308.1-201ENST00000623696 305 ntBASIC2.18□□□□□ -2.06
UPK1AO00322 MIR1322-201ENST00000638013 71 ntBASIC2.18□□□□□ -2.06
UPK1AO00322 AC026241.1-201ENST00000517873 2142 ntBASIC2.18□□□□□ -2.06
UPK1AO00322 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.18□□□□□ -2.06
UPK1AO00322 MTCO1P9-201ENST00000505577 1534 ntBASIC2.17□□□□□ -2.06
UPK1AO00322 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
UPK1AO00322 ANKRD36P1-201ENST00000344424 659 ntBASIC2.17□□□□□ -2.06
UPK1AO00322 RNU6-216P-201ENST00000363282 104 ntBASIC2.17□□□□□ -2.06
UPK1AO00322 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
UPK1AO00322 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
UPK1AO00322 AL079342.2-201ENST00000403367 482 ntBASIC2.17□□□□□ -2.06
UPK1AO00322 RNU2-42P-201ENST00000410697 113 ntBASIC2.17□□□□□ -2.06
UPK1AO00322 USP9YP19-201ENST00000412165 485 ntBASIC2.17□□□□□ -2.06
UPK1AO00322 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.17□□□□□ -2.06
UPK1AO00322 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.17□□□□□ -2.06
UPK1AO00322 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.17□□□□□ -2.06
UPK1AO00322 ATP5F1P1-201ENST00000433775 569 ntBASIC2.17□□□□□ -2.06
UPK1AO00322 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.17□□□□□ -2.06
UPK1AO00322 RPS15AP28-201ENST00000435088 386 ntBASIC2.17□□□□□ -2.06
UPK1AO00322 AC090774.1-201ENST00000435925 246 ntBASIC2.17□□□□□ -2.06
UPK1AO00322 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.17□□□□□ -2.06
UPK1AO00322 ARF4P4-201ENST00000439608 520 ntBASIC2.17□□□□□ -2.06
UPK1AO00322 RPL26P6-201ENST00000440913 438 ntBASIC2.17□□□□□ -2.06
UPK1AO00322 MTCYBP42-201ENST00000444653 1130 ntBASIC2.17□□□□□ -2.06
UPK1AO00322 AC009237.8-201ENST00000445492 379 ntBASIC2.17□□□□□ -2.06
UPK1AO00322 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
UPK1AO00322 AC079776.3-201ENST00000450665 370 ntBASIC2.17□□□□□ -2.06
UPK1AO00322 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.17□□□□□ -2.06
UPK1AO00322 RNU6-420P-201ENST00000458780 107 ntBASIC2.17□□□□□ -2.06
UPK1AO00322 AC090453.1-201ENST00000495560 436 ntBASIC2.17□□□□□ -2.06
UPK1AO00322 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
UPK1AO00322 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.17□□□□□ -2.06
UPK1AO00322 XKRY-201ENST00000510392 1100 ntBASIC2.17□□□□□ -2.06
UPK1AO00322 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC2.17□□□□□ -2.06
UPK1AO00322 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.17□□□□□ -2.06
UPK1AO00322 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.17□□□□□ -2.06
UPK1AO00322 RNA5SP24-201ENST00000516478 95 ntBASIC2.17□□□□□ -2.06
UPK1AO00322 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC2.17□□□□□ -2.06
UPK1AO00322 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.17□□□□□ -2.06
UPK1AO00322 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.17□□□□□ -2.06
UPK1AO00322 AC007115.1-201ENST00000546853 234 ntBASIC2.17□□□□□ -2.06
UPK1AO00322 HSPE1P3-201ENST00000559254 309 ntBASIC2.17□□□□□ -2.06
UPK1AO00322 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.17□□□□□ -2.06
UPK1AO00322 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.17□□□□□ -2.06
UPK1AO00322 MIR4446-201ENST00000578505 67 ntBASIC2.17□□□□□ -2.06
UPK1AO00322 MIR5007-201ENST00000583098 95 ntBASIC2.17□□□□□ -2.06
UPK1AO00322 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.17□□□□□ -2.06
UPK1AO00322 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.17□□□□□ -2.06
UPK1AO00322 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.17□□□□□ -2.06
UPK1AO00322 AC004852.3-201ENST00000614131 326 ntBASIC2.17□□□□□ -2.06
UPK1AO00322 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.17□□□□□ -2.06
UPK1AO00322 AC010975.3-201ENST00000618727 978 ntBASIC2.17□□□□□ -2.06
UPK1AO00322 AC079597.1-201ENST00000624306 508 ntBASIC2.17□□□□□ -2.06
UPK1AO00322 AP000553.5-201ENST00000641933 54 ntBASIC2.17□□□□□ -2.06
UPK1AO00322 OR5H6-203ENST00000642105 978 ntBASIC2.17□□□□□ -2.06
UPK1AO00322 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
UPK1AO00322 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
UPK1AO00322 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.17□□□□□ -2.06
UPK1AO00322 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
UPK1AO00322 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.16□□□□□ -2.06
UPK1AO00322 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
UPK1AO00322 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
UPK1AO00322 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
UPK1AO00322 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
UPK1AO00322 RNU1-105P-201ENST00000363470 161 ntBASIC2.16□□□□□ -2.06
UPK1AO00322 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.16□□□□□ -2.06
UPK1AO00322 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.16□□□□□ -2.06
UPK1AO00322 SNORA36C-201ENST00000384289 132 ntBASIC2.16□□□□□ -2.06
UPK1AO00322 SNORA67.4-201ENST00000384688 142 ntBASIC2.16□□□□□ -2.06
UPK1AO00322 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
UPK1AO00322 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.16□□□□□ -2.06
UPK1AO00322 RPS7P9-201ENST00000414704 586 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms