Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.41□□□□□ -1.7
SHISA3A0PJX4 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SHISA3A0PJX4 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
SHISA3A0PJX4 AC109780.1-201ENST00000451768 1344 ntBASIC4.41□□□□□ -1.7
SHISA3A0PJX4 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.41□□□□□ -1.7
SHISA3A0PJX4 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SHISA3A0PJX4 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.41□□□□□ -1.7
SHISA3A0PJX4 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SHISA3A0PJX4 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SHISA3A0PJX4 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SHISA3A0PJX4 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SHISA3A0PJX4 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SHISA3A0PJX4 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SHISA3A0PJX4 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.4□□□□□ -1.7
SHISA3A0PJX4 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SHISA3A0PJX4 AC009643.2-201ENST00000603543 1448 ntBASIC4.4□□□□□ -1.7
SHISA3A0PJX4 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
SHISA3A0PJX4 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
SHISA3A0PJX4 OR56A5-201ENST00000340110 738 ntBASIC4.4□□□□□ -1.71
SHISA3A0PJX4 RNA5SP335-201ENST00000363817 110 ntBASIC4.4□□□□□ -1.71
SHISA3A0PJX4 MIR301A-201ENST00000385261 86 ntBASIC4.4□□□□□ -1.71
SHISA3A0PJX4 SNORD96B-201ENST00000386148 79 ntBASIC4.4□□□□□ -1.71
SHISA3A0PJX4 MIR1302-6-201ENST00000408466 90 ntBASIC4.4□□□□□ -1.71
SHISA3A0PJX4 RN7SKP125-201ENST00000410481 302 ntBASIC4.4□□□□□ -1.71
SHISA3A0PJX4 BMS1P17-202ENST00000416720 316 ntBASIC4.4□□□□□ -1.71
SHISA3A0PJX4 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.4□□□□□ -1.71
SHISA3A0PJX4 RBMY1KP-201ENST00000423480 476 ntBASIC4.4□□□□□ -1.71
SHISA3A0PJX4 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.4□□□□□ -1.71
SHISA3A0PJX4 ARL5AP4-201ENST00000430731 512 ntBASIC4.4□□□□□ -1.71
SHISA3A0PJX4 HSPD1P21-201ENST00000436541 245 ntBASIC4.4□□□□□ -1.71
SHISA3A0PJX4 AL589765.3-201ENST00000446084 462 ntBASIC4.4□□□□□ -1.71
SHISA3A0PJX4 CHEK2P4-201ENST00000450340 246 ntBASIC4.4□□□□□ -1.71
SHISA3A0PJX4 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.4□□□□□ -1.71
SHISA3A0PJX4 IFNWP4-201ENST00000453148 294 ntBASIC4.4□□□□□ -1.71
SHISA3A0PJX4 MTCO3P8-201ENST00000453691 755 ntBASIC4.4□□□□□ -1.71
SHISA3A0PJX4 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.4□□□□□ -1.71
SHISA3A0PJX4 RNU6-143P-201ENST00000516942 93 ntBASIC4.4□□□□□ -1.71
SHISA3A0PJX4 AC144568.1-201ENST00000520139 137 ntBASIC4.4□□□□□ -1.71
SHISA3A0PJX4 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SHISA3A0PJX4 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.4□□□□□ -1.71
SHISA3A0PJX4 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.4□□□□□ -1.71
SHISA3A0PJX4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.4□□□□□ -1.71
SHISA3A0PJX4 AL049872.1-201ENST00000556323 322 ntBASIC4.4□□□□□ -1.71
SHISA3A0PJX4 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.4□□□□□ -1.71
SHISA3A0PJX4 HMGB3P26-201ENST00000560051 582 ntBASIC4.4□□□□□ -1.71
SHISA3A0PJX4 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.4□□□□□ -1.71
SHISA3A0PJX4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.4□□□□□ -1.71
SHISA3A0PJX4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.4□□□□□ -1.71
SHISA3A0PJX4 FKBP1AP1-201ENST00000594588 318 ntBASIC4.4□□□□□ -1.71
SHISA3A0PJX4 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.4□□□□□ -1.71
SHISA3A0PJX4 MTND4LP5-201ENST00000605152 292 ntBASIC4.4□□□□□ -1.71
SHISA3A0PJX4 MIR6862-1-201ENST00000613016 70 ntBASIC4.4□□□□□ -1.71
SHISA3A0PJX4 MIR6862-2-201ENST00000614755 70 ntBASIC4.4□□□□□ -1.71
SHISA3A0PJX4 AC078938.1-201ENST00000620993 318 ntBASIC4.4□□□□□ -1.71
SHISA3A0PJX4 FP236240.3-201ENST00000623061 327 ntBASIC4.4□□□□□ -1.71
SHISA3A0PJX4 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.4□□□□□ -1.71
SHISA3A0PJX4 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.4□□□□□ -1.71
SHISA3A0PJX4 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SHISA3A0PJX4 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.71
SHISA3A0PJX4 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
SHISA3A0PJX4 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SHISA3A0PJX4 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
SHISA3A0PJX4 AC093535.2-201ENST00000624769 2326 ntBASIC4.4□□□□□ -1.71
SHISA3A0PJX4 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
SHISA3A0PJX4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SHISA3A0PJX4 AL365440.1-201ENST00000436135 2167 ntBASIC4.4□□□□□ -1.71
SHISA3A0PJX4 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SHISA3A0PJX4 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SHISA3A0PJX4 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SHISA3A0PJX4 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.39□□□□□ -1.71
SHISA3A0PJX4 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SHISA3A0PJX4 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.39□□□□□ -1.71
SHISA3A0PJX4 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SHISA3A0PJX4 ASNSP1-201ENST00000518311 1939 ntBASIC4.39□□□□□ -1.71
SHISA3A0PJX4 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
SHISA3A0PJX4 RNU6-1179P-201ENST00000384667 107 ntBASIC4.39□□□□□ -1.71
SHISA3A0PJX4 AL591034.2-201ENST00000402839 359 ntBASIC4.39□□□□□ -1.71
SHISA3A0PJX4 RNU6-325P-201ENST00000411132 105 ntBASIC4.39□□□□□ -1.71
SHISA3A0PJX4 AF186996.5-201ENST00000418098 904 ntBASIC4.39□□□□□ -1.71
SHISA3A0PJX4 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.39□□□□□ -1.71
SHISA3A0PJX4 AL451062.2-201ENST00000427515 271 ntBASIC4.39□□□□□ -1.71
SHISA3A0PJX4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.39□□□□□ -1.71
SHISA3A0PJX4 USP9YP7-201ENST00000436723 430 ntBASIC4.39□□□□□ -1.71
SHISA3A0PJX4 RPS29P10-201ENST00000439197 166 ntBASIC4.39□□□□□ -1.71
SHISA3A0PJX4 USP9YP32-201ENST00000452432 430 ntBASIC4.39□□□□□ -1.71
SHISA3A0PJX4 RNU6-1132P-201ENST00000459214 107 ntBASIC4.39□□□□□ -1.71
SHISA3A0PJX4 HSPE1P6-201ENST00000479457 291 ntBASIC4.39□□□□□ -1.71
SHISA3A0PJX4 SUMO2P6-201ENST00000505273 288 ntBASIC4.39□□□□□ -1.71
SHISA3A0PJX4 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.39□□□□□ -1.71
SHISA3A0PJX4 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.39□□□□□ -1.71
SHISA3A0PJX4 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.39□□□□□ -1.71
SHISA3A0PJX4 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.39□□□□□ -1.71
SHISA3A0PJX4 MIR1273C-201ENST00000578669 77 ntBASIC4.39□□□□□ -1.71
SHISA3A0PJX4 CPDP1-201ENST00000579660 283 ntBASIC4.39□□□□□ -1.71
SHISA3A0PJX4 AC078899.3-201ENST00000599065 212 ntBASIC4.39□□□□□ -1.71
SHISA3A0PJX4 AP000787.2-201ENST00000604432 568 ntBASIC4.39□□□□□ -1.71
SHISA3A0PJX4 AC141273.2-201ENST00000618989 130 ntBASIC4.39□□□□□ -1.71
SHISA3A0PJX4 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.39□□□□□ -1.71
SHISA3A0PJX4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.39□□□□□ -1.71
SHISA3A0PJX4 AL512643.1-201ENST00000635735 524 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms