Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TCRBV7S3A2A0A539 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 RNU6-1120P-201ENST00000362988 108 ntBASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 RNU6-1085P-201ENST00000363576 107 ntBASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 RNA5SP51-201ENST00000364750 119 ntBASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 RNU6-1283P-201ENST00000365314 105 ntBASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 AP002088.1-201ENST00000382740 395 ntBASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 RNU6-74P-201ENST00000384235 107 ntBASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 RNU6-456P-201ENST00000384493 107 ntBASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 MIR558-201ENST00000384920 94 ntBASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 RPL23AP48-201ENST00000406913 488 ntBASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 RN7SKP159-201ENST00000410657 292 ntBASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 UBE2FP1-201ENST00000416536 447 ntBASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 TOMM22P1-201ENST00000418578 312 ntBASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 AL353193.1-201ENST00000421444 268 ntBASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 OR2AS1P-201ENST00000427827 319 ntBASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 AL359073.1-201ENST00000448036 403 ntBASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 AC140076.1-201ENST00000449897 361 ntBASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 AL645939.1-201ENST00000453429 797 ntBASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 AC004801.2-202ENST00000463559 283 ntBASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 RPS27AP1-201ENST00000475545 471 ntBASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 AC078918.1-201ENST00000498515 228 ntBASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 Y_RNA.693-201ENST00000516641 110 ntBASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 RNU6-410P-201ENST00000517006 107 ntBASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 AC123904.3-201ENST00000547218 814 ntBASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 MIR4425-201ENST00000580572 84 ntBASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 ELOCP28-201ENST00000590044 317 ntBASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 AC006116.10-201ENST00000591836 581 ntBASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 AC244100.1-202ENST00000621554 382 ntBASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 MIR3688-2-201ENST00000636963 87 ntBASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 AC009812.4-201ENST00000569134 1805 ntBASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
TCRBV7S3A2A0A539 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 AC007685.1-201ENST00000329806 452 ntBASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 SNORA7.2-201ENST00000364446 145 ntBASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 RNU4-12P-201ENST00000365233 139 ntBASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 RNU6-76P-201ENST00000384060 104 ntBASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 RNU6-39P-201ENST00000384344 107 ntBASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 AL136372.1-201ENST00000403060 228 ntBASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 Y_RNA.625-201ENST00000411256 107 ntBASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 RN7SKP53-201ENST00000411337 315 ntBASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 RPL21P24-201ENST00000413752 448 ntBASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 MTND1P23-201ENST00000416931 372 ntBASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 AC068533.1-201ENST00000418542 415 ntBASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 DUTP6-201ENST00000425573 462 ntBASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 MTATP6P4-201ENST00000427725 675 ntBASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 MED13P1-201ENST00000428342 171 ntBASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 SNORD97-201ENST00000459187 142 ntBASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 MTCO3P38-201ENST00000468910 766 ntBASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 AC010285.1-201ENST00000470580 392 ntBASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 MIR2276-201ENST00000516886 89 ntBASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 SNORA31.22-201ENST00000517204 135 ntBASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 MIR2116-201ENST00000517221 80 ntBASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 FAM60DP-201ENST00000524174 632 ntBASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 AK6P1-201ENST00000540219 478 ntBASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 ARL2BPP2-201ENST00000550907 489 ntBASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 PARP1P2-201ENST00000556806 195 ntBASIC3.61□□□□□ -1.83
TCRBV7S3A2A0A539 RPL21P12-201ENST00000559810 515 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms