Protein–RNA interactions for Protein: Q9Y661

HS3ST4, Heparan sulfate glucosamine 3-O-sulfotransferase 4, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST4Q9Y661 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 MIR372-201ENST00000362225 67 ntBASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 RNU1-108P-201ENST00000362556 161 ntBASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 MTCYBP8-201ENST00000422855 651 ntBASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 AL138799.3-201ENST00000438968 350 ntBASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 RNU6-329P-201ENST00000459618 107 ntBASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 SNORD19B-201ENST00000459623 84 ntBASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 HMGN2P26-201ENST00000463169 339 ntBASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 RN7SL585P-201ENST00000470538 280 ntBASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 AC006517.1-201ENST00000480485 328 ntBASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 AC021382.1-201ENST00000483523 359 ntBASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 RPL29P14-201ENST00000495837 428 ntBASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 AC007224.1-201ENST00000564410 144 ntBASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 MIR3171-201ENST00000584270 74 ntBASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 AC008638.3-201ENST00000603341 463 ntBASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 AC130324.3-201ENST00000614165 542 ntBASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 AC008121.3-201ENST00000618726 433 ntBASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 AC079597.1-201ENST00000624306 508 ntBASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 AC008785.1-201ENST00000624475 456 ntBASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 RNA5SP196-201ENST00000625967 102 ntBASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.22□□□□□ -1.73
HS3ST4Q9Y661 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
HS3ST4Q9Y661 ASNSP3-201ENST00000451989 1306 ntBASIC4.21□□□□□ -1.73
HS3ST4Q9Y661 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
HS3ST4Q9Y661 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 SPRR2C-201ENST00000290702 219 ntBASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 Y_RNA.259-201ENST00000364619 101 ntBASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 RNU6-606P-201ENST00000384721 111 ntBASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 AL583834.1-201ENST00000406943 343 ntBASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 AC092447.6-201ENST00000414578 210 ntBASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 NDUFS5P3-201ENST00000450668 321 ntBASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 AC130509.1-201ENST00000464158 433 ntBASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 AC114797.1-201ENST00000514003 728 ntBASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 RN7SKP21-201ENST00000516503 220 ntBASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 RN7SKP256-201ENST00000517201 314 ntBASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 TRMT10BP1-201ENST00000519377 943 ntBASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 AC134698.5-201ENST00000519444 336 ntBASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 IFITM8P-201ENST00000522529 394 ntBASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 SETP2-201ENST00000553886 926 ntBASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 AC026464.5-201ENST00000562497 722 ntBASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 AL355802.3-201ENST00000607571 545 ntBASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 AC040896.1-201ENST00000613819 479 ntBASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 AL590099.1-201ENST00000615276 138 ntBASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 SNX18P1Y-201ENST00000616231 511 ntBASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 AC068724.3-201ENST00000625906 87 ntBASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.21□□□□□ -1.74
HS3ST4Q9Y661 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
HS3ST4Q9Y661 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.2□□□□□ -1.74
HS3ST4Q9Y661 MARK2P15-201ENST00000432204 2186 ntBASIC4.2□□□□□ -1.74
HS3ST4Q9Y661 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
HS3ST4Q9Y661 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
HS3ST4Q9Y661 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 156 ms