Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.37□□□□□ -2.03
RHBDD3Q9Y3P4 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.37□□□□□ -2.03
RHBDD3Q9Y3P4 AL513175.2-201ENST00000422071 443 ntBASIC2.37□□□□□ -2.03
RHBDD3Q9Y3P4 AC112220.1-201ENST00000434628 355 ntBASIC2.37□□□□□ -2.03
RHBDD3Q9Y3P4 MTCYBP45-201ENST00000435243 565 ntBASIC2.37□□□□□ -2.03
RHBDD3Q9Y3P4 DPPA3P1-201ENST00000448050 469 ntBASIC2.37□□□□□ -2.03
RHBDD3Q9Y3P4 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.37□□□□□ -2.03
RHBDD3Q9Y3P4 AP000852.1-201ENST00000472460 573 ntBASIC2.37□□□□□ -2.03
RHBDD3Q9Y3P4 LARP1BP2-201ENST00000486594 519 ntBASIC2.37□□□□□ -2.03
RHBDD3Q9Y3P4 AC026427.2-201ENST00000506228 536 ntBASIC2.37□□□□□ -2.03
RHBDD3Q9Y3P4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.37□□□□□ -2.03
RHBDD3Q9Y3P4 AC022447.1-201ENST00000515358 464 ntBASIC2.37□□□□□ -2.03
RHBDD3Q9Y3P4 AC025881.1-201ENST00000518851 512 ntBASIC2.37□□□□□ -2.03
RHBDD3Q9Y3P4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.37□□□□□ -2.03
RHBDD3Q9Y3P4 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
RHBDD3Q9Y3P4 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RHBDD3Q9Y3P4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.37□□□□□ -2.03
RHBDD3Q9Y3P4 CYCSP39-201ENST00000565821 309 ntBASIC2.37□□□□□ -2.03
RHBDD3Q9Y3P4 MIR5194-201ENST00000582634 120 ntBASIC2.37□□□□□ -2.03
RHBDD3Q9Y3P4 VN1R78P-201ENST00000597393 564 ntBASIC2.37□□□□□ -2.03
RHBDD3Q9Y3P4 AC005776.1-201ENST00000603164 290 ntBASIC2.37□□□□□ -2.03
RHBDD3Q9Y3P4 AL445435.1-201ENST00000604232 665 ntBASIC2.37□□□□□ -2.03
RHBDD3Q9Y3P4 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.37□□□□□ -2.03
RHBDD3Q9Y3P4 MIR7515-201ENST00000637837 67 ntBASIC2.37□□□□□ -2.03
RHBDD3Q9Y3P4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
RHBDD3Q9Y3P4 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
RHBDD3Q9Y3P4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
RHBDD3Q9Y3P4 DDX10P1-201ENST00000448545 1933 ntBASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 SNORA67.1-201ENST00000364749 141 ntBASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 Y_RNA.333-201ENST00000365274 102 ntBASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 RNU1-138P-201ENST00000384093 164 ntBASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 RNU6-1072P-201ENST00000384703 107 ntBASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 RNU6-443P-201ENST00000384780 107 ntBASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 MIR592-201ENST00000384959 97 ntBASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 DHFRP6-201ENST00000401776 268 ntBASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 RPS3AP12-201ENST00000443616 753 ntBASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 TRGVB-201ENST00000453257 471 ntBASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 EIF4EP3-201ENST00000498782 656 ntBASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 AC093801.2-201ENST00000503966 1050 ntBASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 RPL37P25-201ENST00000507308 276 ntBASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 AC117522.3-201ENST00000507974 584 ntBASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 HIGD1AP13-201ENST00000509878 289 ntBASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 AC093677.1-201ENST00000514414 678 ntBASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 MTND5P4-201ENST00000514978 288 ntBASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 SNORA31.15-201ENST00000516771 132 ntBASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 DEFB130C-202ENST00000530001 230 ntBASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 SLC2A13P1-201ENST00000531560 322 ntBASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 AC023824.2-201ENST00000566185 400 ntBASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 AP000787.2-201ENST00000604432 568 ntBASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 AC093732.2-201ENST00000607950 274 ntBASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 AC010297.1-201ENST00000623948 149 ntBASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
RHBDD3Q9Y3P4 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 RNU5E-8P-201ENST00000363502 116 ntBASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 RNU6-1122P-201ENST00000384449 107 ntBASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 MIR888-201ENST00000401186 77 ntBASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 RNU2-33P-201ENST00000410344 192 ntBASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 AL592148.1-201ENST00000413568 445 ntBASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 AC006946.1-201ENST00000429106 328 ntBASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 PTGES3P1-201ENST00000439531 483 ntBASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 MRPS17P3-201ENST00000465453 385 ntBASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 AC133134.1-201ENST00000466800 359 ntBASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 AC011825.1-201ENST00000484967 388 ntBASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 MRPL42P6-201ENST00000486397 371 ntBASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 RNA5SP367-201ENST00000516557 118 ntBASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 RNU6-840P-201ENST00000517275 65 ntBASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 VBP1-203ENST00000535916 944 ntTSL 2 BASIC2.35□□□□□ -2.03
RHBDD3Q9Y3P4 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms