Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 RNU6-562P-201ENST00000362731 107 ntBASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 SNORA62.3-201ENST00000365110 153 ntBASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 UBBP2-201ENST00000376781 231 ntBASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 RNU6-432P-201ENST00000384196 109 ntBASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 RNU6-1127P-201ENST00000384580 107 ntBASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 RNU4-6P-201ENST00000410804 122 ntBASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 RNU6-516P-201ENST00000411381 104 ntBASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 RPS15AP27-201ENST00000449183 343 ntBASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 AC008958.1-201ENST00000511047 682 ntBASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 RFPL4AP5-201ENST00000514977 504 ntBASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 AC106782.4-201ENST00000568264 210 ntBASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 MIR6128-201ENST00000615528 109 ntBASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 ATP5A1P2-202ENST00000616464 443 ntBASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 AC092608.2-201ENST00000624427 218 ntBASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 EXOC5P1-201ENST00000510543 1969 ntBASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 SAGE4P-201ENST00000442271 3381 ntBASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 Z95331.1-201ENST00000623075 23112 ntBASIC5.67□□□□□ -1.5
RTCBQ9Y3I0 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 Y_RNA.80-201ENST00000362996 102 ntBASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 RNVU1-3-201ENST00000364313 161 ntBASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 SET-203ENST00000372688 801 ntTSL 2 BASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 RNY1P14-201ENST00000384426 108 ntBASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 Y_RNA.574-201ENST00000384766 95 ntBASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 MIR3065-201ENST00000390137 79 ntBASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 AC007738.1-201ENST00000413892 348 ntBASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 AL356095.1-201ENST00000417217 199 ntBASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 CYP4F29P-201ENST00000420685 446 ntBASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 RPL23AP52-201ENST00000439311 478 ntBASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 AC012671.1-201ENST00000451912 203 ntBASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 AC135721.1-201ENST00000497954 479 ntBASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 RPL23AP55-201ENST00000498163 452 ntBASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 RNA5SP230-201ENST00000517039 122 ntBASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 FTH1P11-201ENST00000517577 551 ntBASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 RANP3-201ENST00000530970 276 ntBASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 MIR4660-201ENST00000583549 74 ntBASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 AC123786.2-201ENST00000603459 275 ntBASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 AC079587.1-201ENST00000603846 277 ntBASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 AL354984.3-201ENST00000604803 325 ntBASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 MIR6867-201ENST00000610636 67 ntBASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 GABPAP-201ENST00000419271 1356 ntBASIC5.66□□□□□ -1.5
RTCBQ9Y3I0 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RTCBQ9Y3I0 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.65□□□□□ -1.5
RTCBQ9Y3I0 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RTCBQ9Y3I0 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
RTCBQ9Y3I0 Y_RNA.455-201ENST00000384230 98 ntBASIC5.65□□□□□ -1.5
RTCBQ9Y3I0 U3.29-201ENST00000391296 212 ntBASIC5.65□□□□□ -1.5
RTCBQ9Y3I0 HNRNPDLP1-201ENST00000412834 550 ntBASIC5.65□□□□□ -1.5
RTCBQ9Y3I0 BX682237.1-201ENST00000415016 335 ntBASIC5.65□□□□□ -1.5
RTCBQ9Y3I0 AC093151.1-201ENST00000427711 313 ntBASIC5.65□□□□□ -1.5
RTCBQ9Y3I0 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.65□□□□□ -1.5
RTCBQ9Y3I0 PPIAP3-201ENST00000450588 505 ntBASIC5.65□□□□□ -1.5
RTCBQ9Y3I0 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.65□□□□□ -1.5
RTCBQ9Y3I0 RPL5P30-201ENST00000465511 891 ntBASIC5.65□□□□□ -1.5
RTCBQ9Y3I0 AC116337.1-201ENST00000509680 687 ntBASIC5.65□□□□□ -1.5
RTCBQ9Y3I0 AC016065.2-201ENST00000514530 444 ntBASIC5.65□□□□□ -1.5
RTCBQ9Y3I0 Y_RNA.708-201ENST00000516950 96 ntBASIC5.65□□□□□ -1.5
RTCBQ9Y3I0 RNU6-685P-201ENST00000517088 95 ntBASIC5.65□□□□□ -1.5
RTCBQ9Y3I0 RNU1-45P-201ENST00000517191 141 ntBASIC5.65□□□□□ -1.5
RTCBQ9Y3I0 AC009812.2-201ENST00000517657 457 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms