Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 PCAT14-202ENST00000627127 3935 ntBASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
ZC3H4Q9UPT8 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 AL137003.2-201ENST00000606924 2538 ntBASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 RNU6-1303P-201ENST00000364841 107 ntBASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 Y_RNA.376-201ENST00000365638 108 ntBASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 RNA5SP397-201ENST00000391323 118 ntBASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 ENSAP1-201ENST00000392855 326 ntBASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 AL391219.1-201ENST00000422570 483 ntBASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 BX276092.3-201ENST00000424182 230 ntBASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 AL645568.3-201ENST00000433683 316 ntBASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 CHEK2P4-201ENST00000450340 246 ntBASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 PCMTD1P1-201ENST00000455560 355 ntBASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 RNU7-138P-201ENST00000459479 64 ntBASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 RN7SL443P-201ENST00000464331 290 ntBASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 AC011005.2-201ENST00000487324 359 ntBASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 RPL17P19-201ENST00000489069 552 ntBASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 AC022133.1-201ENST00000490961 571 ntBASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 GZMAP1-201ENST00000503054 631 ntBASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 LEF1-218ENST00000512172 598 ntTSL 2 BASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 RNU6-397P-201ENST00000516226 104 ntBASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 Y_RNA.673-201ENST00000516306 88 ntBASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 AC006600.1-201ENST00000572529 153 ntBASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 AC007619.2-201ENST00000605743 379 ntBASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 AC098479.1-201ENST00000609225 154 ntBASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 AC010632.3-201ENST00000611377 369 ntBASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 AC131238.1-201ENST00000617135 328 ntBASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 MIR4496-201ENST00000635896 61 ntBASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
ZC3H4Q9UPT8 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 AC008669.1-201ENST00000565823 2178 ntBASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 AL590240.1-201ENST00000334118 313 ntBASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 Y_RNA.64-201ENST00000362845 102 ntBASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 RNU6-45P-201ENST00000384471 107 ntBASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 RNU6-790P-201ENST00000384479 105 ntBASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 AC114755.2-201ENST00000413520 361 ntBASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 AL451062.2-201ENST00000427515 271 ntBASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 TRAPPC2P9-201ENST00000434556 343 ntBASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 BX276092.4-201ENST00000452056 248 ntBASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 RPS5P7-201ENST00000456664 608 ntBASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 SNORA40.14-201ENST00000516543 86 ntBASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 IGKV2D-23-201ENST00000518179 286 ntBASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 RRN3P3-201ENST00000549207 578 ntBASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 AC106785.1-201ENST00000565935 262 ntBASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 AL034351.1-201ENST00000605288 668 ntBASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 MTND5P6-201ENST00000422338 1798 ntBASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.06□□□□□ -1.44
ZC3H4Q9UPT8 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms