Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 AP004242.1-201ENST00000533701 349 ntBASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 AP005205.1-201ENST00000563503 508 ntBASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 AC099489.2-201ENST00000574976 260 ntBASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 AC060771.1-201ENST00000582031 164 ntBASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 AC069200.1-201ENST00000609511 323 ntBASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 AL356321.1-201ENST00000621360 228 ntBASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.77□□□□□ -1.81
NCKIPSDQ9NZQ3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 AP001486.2-201ENST00000561652 5113 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 AC024560.2-201ENST00000507981 1497 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 GNG5P1-201ENST00000255500 204 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 FRG1BP-201ENST00000278882 761 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 XIAPP3-201ENST00000312918 795 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 RNU6-1155P-201ENST00000363554 107 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 SNORA73.2-201ENST00000364946 201 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 Y_RNA.372-201ENST00000365599 102 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 SNORD115-47-201ENST00000391226 86 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 CALM2P3-201ENST00000400429 449 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 OR1AA1P-201ENST00000419597 916 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 ISCA1P6-201ENST00000427740 390 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 RPL23AP83-201ENST00000434984 473 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 RPL22P17-201ENST00000438729 315 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 AC010655.1-201ENST00000449336 292 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 HMGB3P8-201ENST00000449709 577 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 PRSS3P4-201ENST00000453323 162 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 SNRPGP5-201ENST00000456003 220 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 AC027673.1-201ENST00000456245 405 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 snoU13.24-201ENST00000458998 104 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 RPL7P49-201ENST00000471402 708 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 MLLT10P2-201ENST00000506434 249 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 AC005921.1-201ENST00000510589 286 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 RN7SKP18-201ENST00000516005 275 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 RNA5SP208-201ENST00000516156 78 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 RNU6-1073P-201ENST00000517182 106 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 IGKV2D-19-201ENST00000523346 262 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 AP003497.1-201ENST00000528472 562 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 AC118273.2-201ENST00000532092 465 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 AC123904.2-201ENST00000548059 300 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 RPS3AP4-201ENST00000555161 764 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 SNORA59B-202ENST00000578183 701 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 UBE2L4-201ENST00000587688 464 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 CKS1BP3-201ENST00000600888 237 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 AP000860.1-201ENST00000605250 559 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 U3.45-201ENST00000607547 219 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 AC007014.2-201ENST00000615581 479 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 AC072046.2-201ENST00000618366 268 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 AC012314.7-201ENST00000619693 93 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 AC092628.2-201ENST00000622492 339 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 AL158801.5-201ENST00000623123 465 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 MIR6863-201ENST00000636112 90 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 EXOC5P1-201ENST00000510543 1969 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 AC073544.1-201ENST00000600110 1595 ntBASIC3.76□□□□□ -1.81
NCKIPSDQ9NZQ3 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 RNU6-600P-201ENST00000362524 99 ntBASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 RNU6-1078P-201ENST00000364522 103 ntBASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 U8.11-201ENST00000384699 133 ntBASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 U8.12-201ENST00000384701 133 ntBASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 MIR34B-201ENST00000385076 84 ntBASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 MIR607-201ENST00000385241 96 ntBASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 GSTA9P-201ENST00000406231 611 ntBASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 FCF1P10-201ENST00000407590 479 ntBASIC3.75□□□□□ -1.81
NCKIPSDQ9NZQ3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms