Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.23□□□□□ -1.73
MKS1Q9NXB0 RNA5SP175-201ENST00000364275 119 ntBASIC4.23□□□□□ -1.73
MKS1Q9NXB0 Y_RNA.303-201ENST00000364998 94 ntBASIC4.23□□□□□ -1.73
MKS1Q9NXB0 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
MKS1Q9NXB0 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
MKS1Q9NXB0 U1.1-201ENST00000384101 164 ntBASIC4.23□□□□□ -1.73
MKS1Q9NXB0 RNA5SP87-201ENST00000384155 118 ntBASIC4.23□□□□□ -1.73
MKS1Q9NXB0 SNORA37-201ENST00000384504 129 ntBASIC4.23□□□□□ -1.73
MKS1Q9NXB0 Y_RNA.576-201ENST00000384781 102 ntBASIC4.23□□□□□ -1.73
MKS1Q9NXB0 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
MKS1Q9NXB0 RNU6-328P-201ENST00000390887 106 ntBASIC4.23□□□□□ -1.73
MKS1Q9NXB0 MIR298-201ENST00000401212 88 ntBASIC4.23□□□□□ -1.73
MKS1Q9NXB0 AL136116.1-201ENST00000403591 381 ntBASIC4.23□□□□□ -1.73
MKS1Q9NXB0 RNU2-29P-201ENST00000410423 189 ntBASIC4.23□□□□□ -1.73
MKS1Q9NXB0 RNU6-387P-201ENST00000411331 105 ntBASIC4.23□□□□□ -1.73
MKS1Q9NXB0 AL513331.1-201ENST00000411908 397 ntBASIC4.23□□□□□ -1.73
MKS1Q9NXB0 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.23□□□□□ -1.73
MKS1Q9NXB0 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.23□□□□□ -1.73
MKS1Q9NXB0 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.23□□□□□ -1.73
MKS1Q9NXB0 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.23□□□□□ -1.73
MKS1Q9NXB0 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.23□□□□□ -1.73
MKS1Q9NXB0 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.23□□□□□ -1.73
MKS1Q9NXB0 AL118520.1-201ENST00000450770 291 ntBASIC4.23□□□□□ -1.73
MKS1Q9NXB0 AC091685.2-201ENST00000454924 864 ntBASIC4.23□□□□□ -1.73
MKS1Q9NXB0 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.23□□□□□ -1.73
MKS1Q9NXB0 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.23□□□□□ -1.73
MKS1Q9NXB0 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.23□□□□□ -1.73
MKS1Q9NXB0 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.23□□□□□ -1.73
MKS1Q9NXB0 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.23□□□□□ -1.73
MKS1Q9NXB0 SNORD60.2-201ENST00000516883 86 ntBASIC4.23□□□□□ -1.73
MKS1Q9NXB0 RN7SKP60-201ENST00000516985 239 ntBASIC4.23□□□□□ -1.73
MKS1Q9NXB0 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.23□□□□□ -1.73
MKS1Q9NXB0 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.23□□□□□ -1.73
MKS1Q9NXB0 OR5B10P-201ENST00000532869 642 ntBASIC4.23□□□□□ -1.73
MKS1Q9NXB0 AP006289.1-201ENST00000538089 277 ntBASIC4.23□□□□□ -1.73
MKS1Q9NXB0 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.23□□□□□ -1.73
MKS1Q9NXB0 AC063950.1-201ENST00000552036 308 ntBASIC4.23□□□□□ -1.73
MKS1Q9NXB0 AC051619.2-201ENST00000559063 397 ntBASIC4.23□□□□□ -1.73
MKS1Q9NXB0 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.23□□□□□ -1.73
MKS1Q9NXB0 MIR3690-201ENST00000580266 75 ntBASIC4.23□□□□□ -1.73
MKS1Q9NXB0 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
MKS1Q9NXB0 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.23□□□□□ -1.73
MKS1Q9NXB0 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.23□□□□□ -1.73
MKS1Q9NXB0 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
MKS1Q9NXB0 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
MKS1Q9NXB0 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
MKS1Q9NXB0 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
MKS1Q9NXB0 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
MKS1Q9NXB0 CASC19-280ENST00000642102 1351 ntBASIC4.23□□□□□ -1.73
MKS1Q9NXB0 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
MKS1Q9NXB0 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
MKS1Q9NXB0 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
MKS1Q9NXB0 AC015813.6-201ENST00000624409 5808 ntBASIC4.22□□□□□ -1.73
MKS1Q9NXB0 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
MKS1Q9NXB0 RIOK3P1-201ENST00000418778 1528 ntBASIC4.22□□□□□ -1.73
MKS1Q9NXB0 SNORD113.2-201ENST00000364166 89 ntBASIC4.22□□□□□ -1.73
MKS1Q9NXB0 RNU6-903P-201ENST00000391270 109 ntBASIC4.22□□□□□ -1.73
MKS1Q9NXB0 RNA5SP118-201ENST00000410385 109 ntBASIC4.22□□□□□ -1.73
MKS1Q9NXB0 RNU2-71P-201ENST00000411395 189 ntBASIC4.22□□□□□ -1.73
MKS1Q9NXB0 AC009237.5-201ENST00000414271 501 ntBASIC4.22□□□□□ -1.73
MKS1Q9NXB0 AL159169.1-201ENST00000421119 127 ntBASIC4.22□□□□□ -1.73
MKS1Q9NXB0 ATP5JP1-201ENST00000431631 322 ntBASIC4.22□□□□□ -1.73
MKS1Q9NXB0 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.22□□□□□ -1.73
MKS1Q9NXB0 RPL21P133-201ENST00000443666 476 ntBASIC4.22□□□□□ -1.73
MKS1Q9NXB0 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.22□□□□□ -1.73
MKS1Q9NXB0 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.22□□□□□ -1.73
MKS1Q9NXB0 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC4.22□□□□□ -1.73
MKS1Q9NXB0 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.22□□□□□ -1.73
MKS1Q9NXB0 RPL23AP62-201ENST00000463396 453 ntBASIC4.22□□□□□ -1.73
MKS1Q9NXB0 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.22□□□□□ -1.73
MKS1Q9NXB0 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.22□□□□□ -1.73
MKS1Q9NXB0 AC104806.1-201ENST00000508720 308 ntBASIC4.22□□□□□ -1.73
MKS1Q9NXB0 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
MKS1Q9NXB0 SCARNA15.2-201ENST00000516409 127 ntBASIC4.22□□□□□ -1.73
MKS1Q9NXB0 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.22□□□□□ -1.73
MKS1Q9NXB0 SUB1P1-201ENST00000524415 382 ntBASIC4.22□□□□□ -1.73
MKS1Q9NXB0 AF235103.2-201ENST00000525753 346 ntBASIC4.22□□□□□ -1.73
MKS1Q9NXB0 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.22□□□□□ -1.73
MKS1Q9NXB0 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.22□□□□□ -1.73
MKS1Q9NXB0 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.22□□□□□ -1.73
MKS1Q9NXB0 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.22□□□□□ -1.73
MKS1Q9NXB0 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.22□□□□□ -1.73
MKS1Q9NXB0 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.22□□□□□ -1.73
MKS1Q9NXB0 AL035413.2-201ENST00000604801 525 ntBASIC4.22□□□□□ -1.73
MKS1Q9NXB0 AL354984.3-201ENST00000604803 325 ntBASIC4.22□□□□□ -1.73
MKS1Q9NXB0 AC010338.1-201ENST00000621823 717 ntBASIC4.22□□□□□ -1.73
MKS1Q9NXB0 AP005264.7-201ENST00000625003 745 ntBASIC4.22□□□□□ -1.73
MKS1Q9NXB0 AL008636.1-201ENST00000625038 1018 ntBASIC4.22□□□□□ -1.73
MKS1Q9NXB0 AC008013.2-202ENST00000637965 364 ntBASIC4.22□□□□□ -1.73
MKS1Q9NXB0 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
MKS1Q9NXB0 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
MKS1Q9NXB0 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
MKS1Q9NXB0 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
MKS1Q9NXB0 NACAP2-201ENST00000318548 624 ntBASIC4.21□□□□□ -1.74
MKS1Q9NXB0 RNU6-552P-201ENST00000362869 119 ntBASIC4.21□□□□□ -1.74
MKS1Q9NXB0 RN7SKP103-201ENST00000363848 320 ntBASIC4.21□□□□□ -1.74
MKS1Q9NXB0 RNU6-817P-201ENST00000391083 104 ntBASIC4.21□□□□□ -1.74
MKS1Q9NXB0 RNU6-876P-201ENST00000391295 104 ntBASIC4.21□□□□□ -1.74
MKS1Q9NXB0 AC138393.2-201ENST00000414742 246 ntBASIC4.21□□□□□ -1.74
MKS1Q9NXB0 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms