Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC068870.1-201ENST00000563737 2455 ntBASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 Y_RNA.76-201ENST00000362931 109 ntBASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 Y_RNA.240-201ENST00000364469 95 ntBASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 RNU1-136P-201ENST00000384181 164 ntBASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 RNU6-708P-201ENST00000384217 107 ntBASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 RNU6-417P-201ENST00000384712 107 ntBASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 MIR1286-201ENST00000408112 78 ntBASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 RNU6-394P-201ENST00000410735 107 ntBASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 BMS1P22-201ENST00000414726 313 ntBASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 EEF1B2P6-201ENST00000445713 673 ntBASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 OR2AO1P-201ENST00000476497 403 ntBASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 AC103783.1-201ENST00000520506 373 ntBASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 AC010186.2-204ENST00000537668 439 ntBASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 AC136932.1-201ENST00000574771 208 ntBASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 SNORD84-203ENST00000584275 78 ntBASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 AC007619.2-201ENST00000605743 379 ntBASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
CUEDC1Q9NWM3 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 RNY4P28-201ENST00000365281 93 ntBASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 Y_RNA.541-201ENST00000384640 113 ntBASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 MIR585-201ENST00000384887 94 ntBASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 AL109941.1-201ENST00000401925 229 ntBASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 U3.42-201ENST00000408746 214 ntBASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 RPL37P18-201ENST00000411602 243 ntBASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 DPPA2P3-201ENST00000411853 655 ntBASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 C4BPAP1-201ENST00000415474 1893 ntBASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 NUTF2P3-201ENST00000448540 384 ntBASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 RN7SL826P-201ENST00000479724 288 ntBASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 Y_RNA.689-201ENST00000516589 107 ntBASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 SCARNA24.2-201ENST00000516968 130 ntBASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 AC137627.1-201ENST00000545761 289 ntBASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 AL121917.1-203ENST00000605534 577 ntBASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.44□□□□□ -1.54
CUEDC1Q9NWM3 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 U3.13-201ENST00000364804 214 ntBASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 RNA5SP455-201ENST00000365190 119 ntBASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 RNA5SP131-201ENST00000365452 119 ntBASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 RNU6-933P-201ENST00000384424 107 ntBASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 SNORA53-201ENST00000391141 249 ntBASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 AC005042.1-201ENST00000393397 800 ntBASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 RNU4-65P-201ENST00000410473 140 ntBASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 RNU6-712P-201ENST00000410558 100 ntBASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 RPS15AP6-201ENST00000420703 385 ntBASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 AC073850.1-201ENST00000449243 255 ntBASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 AC093270.2-201ENST00000486157 792 ntBASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 RN7SL30P-201ENST00000488416 306 ntBASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 IGBP1P1-201ENST00000554337 1009 ntBASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 AC068790.4-201ENST00000602474 263 ntBASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 AL158827.2-201ENST00000602494 330 ntBASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 IMMP1LP3-201ENST00000604197 224 ntBASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 AL691447.3-201ENST00000635020 330 ntBASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CUEDC1Q9NWM3 MAPK10-338ENST00000641647 3362 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms