Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 MIR147B-201ENST00000390185 80 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 RNU6-1300P-201ENST00000391046 108 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 U6atac.2-201ENST00000408644 118 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 MTATP6P27-201ENST00000416987 621 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 OFD1P11Y-201ENST00000418213 1177 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 USP9YP20-201ENST00000419224 558 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 TBX18-AS1-201ENST00000423086 421 ntTSL 3 BASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 PTP4A1P7-201ENST00000423476 514 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 RPS3AP44-201ENST00000425466 790 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 SKA2P1-201ENST00000425592 390 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 AC112220.1-201ENST00000434628 355 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 SDR42E1P3-201ENST00000438345 502 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 AC093156.1-201ENST00000440382 670 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 NIPA2P5-201ENST00000452282 464 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 MRPL42P4-201ENST00000453267 443 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 OFD1P3Y-201ENST00000453312 783 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 RPL21P134-201ENST00000453468 483 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 TPRKBP1-201ENST00000456243 481 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 RPL7P19-201ENST00000469948 618 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 TRBV1-201ENST00000476502 284 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 RPL7P18-201ENST00000478965 734 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 AC107032.1-201ENST00000485945 480 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 AC055855.1-201ENST00000489563 579 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 AC008526.1-201ENST00000509149 338 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 AC091965.2-201ENST00000512324 613 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 OR7H2P-201ENST00000513483 306 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 RNA5SP282-201ENST00000516355 108 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 MIR892C-201ENST00000516410 77 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 RNU6ATAC24P-201ENST00000516811 135 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 RN7SKP183-201ENST00000517169 324 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 AC023632.1-201ENST00000518463 375 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 AP005639.2-201ENST00000527592 928 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 AC118273.2-201ENST00000532092 465 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 CBX3P4-201ENST00000538909 354 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 HSBP1P1-201ENST00000555205 166 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 MIR4637-201ENST00000582405 84 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 AP001542.1-201ENST00000591314 200 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 RPP40P2-201ENST00000603596 712 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 AL390208.1-201ENST00000605885 644 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 AL590099.1-201ENST00000615276 138 ntBASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.16□□□□□ -2.22
CDC42SE1Q9NRR8 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.15□□□□□ -2.22
CDC42SE1Q9NRR8 AC110491.1-201ENST00000562191 2010 ntBASIC1.15□□□□□ -2.22
CDC42SE1Q9NRR8 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 MIR16-2-201ENST00000362117 81 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 RNA5SP447-201ENST00000363749 119 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 RNA5SP509-201ENST00000364577 119 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 RNU1-39P-201ENST00000383897 165 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 SNORA7.4-201ENST00000384249 137 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 MIR30B-201ENST00000384850 88 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 SNORD17-201ENST00000390930 237 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 SNRPEP2-201ENST00000397592 279 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 AC099535.1-201ENST00000408928 371 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 RN7SKP158-201ENST00000410453 326 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 BX664727.1-201ENST00000416024 466 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 HSPD1P21-201ENST00000436541 245 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 HSPE1P21-201ENST00000438283 308 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 AC000041.1-201ENST00000439655 175 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 AC092641.1-201ENST00000440229 772 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 MTCO3P43-201ENST00000440974 771 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 RPL7P12-201ENST00000446719 750 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 SEPT14P24-201ENST00000447236 180 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 AC073387.1-201ENST00000453261 709 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 SNORD121B-201ENST00000458838 81 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 HMGB1P36-201ENST00000487709 576 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 AC021678.1-201ENST00000505195 936 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 AC110794.1-201ENST00000505816 425 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 AC121161.1-201ENST00000510606 652 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 RN7SKP18-201ENST00000516005 275 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 SNORA48.9-201ENST00000516419 162 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 OR5AL2P-201ENST00000532185 920 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 PARP1P2-201ENST00000556806 195 ntBASIC1.15□□□□□ -2.23
CDC42SE1Q9NRR8 AL049838.1-201ENST00000563647 981 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms