Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 MTND1P28-201ENST00000435623 950 ntBASIC3.75□□□□□ -1.81
DDX4Q9NQI0 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.75□□□□□ -1.81
DDX4Q9NQI0 AC025750.2-201ENST00000442609 450 ntBASIC3.75□□□□□ -1.81
DDX4Q9NQI0 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.75□□□□□ -1.81
DDX4Q9NQI0 GDI2P2-201ENST00000445131 608 ntBASIC3.75□□□□□ -1.81
DDX4Q9NQI0 AL353691.1-201ENST00000451332 387 ntBASIC3.75□□□□□ -1.81
DDX4Q9NQI0 MRPS31P2-201ENST00000451581 518 ntBASIC3.75□□□□□ -1.81
DDX4Q9NQI0 AL136097.1-201ENST00000456945 913 ntBASIC3.75□□□□□ -1.81
DDX4Q9NQI0 AP1S2P1-201ENST00000457344 379 ntBASIC3.75□□□□□ -1.81
DDX4Q9NQI0 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.75□□□□□ -1.81
DDX4Q9NQI0 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.75□□□□□ -1.81
DDX4Q9NQI0 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.75□□□□□ -1.81
DDX4Q9NQI0 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.75□□□□□ -1.81
DDX4Q9NQI0 RNU6-1003P-201ENST00000517099 105 ntBASIC3.75□□□□□ -1.81
DDX4Q9NQI0 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.75□□□□□ -1.81
DDX4Q9NQI0 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
DDX4Q9NQI0 AP004371.1-201ENST00000525240 214 ntBASIC3.75□□□□□ -1.81
DDX4Q9NQI0 OR4P1P-201ENST00000530808 1136 ntBASIC3.75□□□□□ -1.81
DDX4Q9NQI0 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.75□□□□□ -1.81
DDX4Q9NQI0 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.75□□□□□ -1.81
DDX4Q9NQI0 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.75□□□□□ -1.81
DDX4Q9NQI0 SETP7-201ENST00000552169 453 ntBASIC3.75□□□□□ -1.81
DDX4Q9NQI0 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.75□□□□□ -1.81
DDX4Q9NQI0 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.75□□□□□ -1.81
DDX4Q9NQI0 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.75□□□□□ -1.81
DDX4Q9NQI0 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.75□□□□□ -1.81
DDX4Q9NQI0 MIR3611-201ENST00000584484 83 ntBASIC3.75□□□□□ -1.81
DDX4Q9NQI0 AC005771.1-201ENST00000585581 349 ntBASIC3.75□□□□□ -1.81
DDX4Q9NQI0 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.75□□□□□ -1.81
DDX4Q9NQI0 AL359999.1-201ENST00000604513 294 ntBASIC3.75□□□□□ -1.81
DDX4Q9NQI0 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.75□□□□□ -1.81
DDX4Q9NQI0 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
DDX4Q9NQI0 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
DDX4Q9NQI0 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.75□□□□□ -1.81
DDX4Q9NQI0 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
DDX4Q9NQI0 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.75□□□□□ -1.81
DDX4Q9NQI0 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.75□□□□□ -1.81
DDX4Q9NQI0 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.75□□□□□ -1.81
DDX4Q9NQI0 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.75□□□□□ -1.81
DDX4Q9NQI0 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
DDX4Q9NQI0 AC058791.1-201ENST00000608412 3198 ntBASIC3.74□□□□□ -1.81
DDX4Q9NQI0 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
DDX4Q9NQI0 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
DDX4Q9NQI0 RNU1-140P-201ENST00000365040 165 ntBASIC3.74□□□□□ -1.81
DDX4Q9NQI0 RNU6-533P-201ENST00000384144 107 ntBASIC3.74□□□□□ -1.81
DDX4Q9NQI0 RNU6-1207P-201ENST00000384343 107 ntBASIC3.74□□□□□ -1.81
DDX4Q9NQI0 RNU6-809P-201ENST00000384461 107 ntBASIC3.74□□□□□ -1.81
DDX4Q9NQI0 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
DDX4Q9NQI0 Y_RNA.598-201ENST00000410480 95 ntBASIC3.74□□□□□ -1.81
DDX4Q9NQI0 AL663109.1-201ENST00000411498 844 ntBASIC3.74□□□□□ -1.81
DDX4Q9NQI0 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.74□□□□□ -1.81
DDX4Q9NQI0 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
DDX4Q9NQI0 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.74□□□□□ -1.81
DDX4Q9NQI0 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.74□□□□□ -1.81
DDX4Q9NQI0 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.74□□□□□ -1.81
DDX4Q9NQI0 FAM103A2P-201ENST00000444122 354 ntBASIC3.74□□□□□ -1.81
DDX4Q9NQI0 USP9YP12-201ENST00000450481 570 ntBASIC3.74□□□□□ -1.81
DDX4Q9NQI0 MTND1P9-201ENST00000453775 944 ntBASIC3.74□□□□□ -1.81
DDX4Q9NQI0 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.74□□□□□ -1.81
DDX4Q9NQI0 AC021382.1-201ENST00000483523 359 ntBASIC3.74□□□□□ -1.81
DDX4Q9NQI0 AC097462.2-201ENST00000504623 481 ntBASIC3.74□□□□□ -1.81
DDX4Q9NQI0 ARL2BPP4-201ENST00000506854 471 ntBASIC3.74□□□□□ -1.81
DDX4Q9NQI0 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.74□□□□□ -1.81
DDX4Q9NQI0 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.74□□□□□ -1.81
DDX4Q9NQI0 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.74□□□□□ -1.81
DDX4Q9NQI0 AC090136.1-201ENST00000520009 240 ntBASIC3.74□□□□□ -1.81
DDX4Q9NQI0 AP002963.1-201ENST00000530590 184 ntBASIC3.74□□□□□ -1.81
DDX4Q9NQI0 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.74□□□□□ -1.81
DDX4Q9NQI0 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.74□□□□□ -1.81
DDX4Q9NQI0 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.74□□□□□ -1.81
DDX4Q9NQI0 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.74□□□□□ -1.81
DDX4Q9NQI0 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.74□□□□□ -1.81
DDX4Q9NQI0 MIR5697-201ENST00000578045 78 ntBASIC3.74□□□□□ -1.81
DDX4Q9NQI0 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.74□□□□□ -1.81
DDX4Q9NQI0 AL034351.1-201ENST00000605288 668 ntBASIC3.74□□□□□ -1.81
DDX4Q9NQI0 AC010678.1-201ENST00000614118 713 ntBASIC3.74□□□□□ -1.81
DDX4Q9NQI0 AC079597.1-201ENST00000624306 508 ntBASIC3.74□□□□□ -1.81
DDX4Q9NQI0 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.74□□□□□ -1.81
DDX4Q9NQI0 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.73□□□□□ -1.81
DDX4Q9NQI0 AC091152.2-201ENST00000591628 2569 ntBASIC3.73□□□□□ -1.81
DDX4Q9NQI0 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
DDX4Q9NQI0 HSPA8P1-201ENST00000425843 1833 ntBASIC3.73□□□□□ -1.81
DDX4Q9NQI0 RNU6-263P-201ENST00000363811 107 ntBASIC3.73□□□□□ -1.81
DDX4Q9NQI0 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
DDX4Q9NQI0 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
DDX4Q9NQI0 SNORD115.1-201ENST00000391109 76 ntBASIC3.73□□□□□ -1.81
DDX4Q9NQI0 MIR1289-1-201ENST00000408836 144 ntBASIC3.73□□□□□ -1.81
DDX4Q9NQI0 RNA5SP129-201ENST00000410276 118 ntBASIC3.73□□□□□ -1.81
DDX4Q9NQI0 HMGN1P14-201ENST00000412459 517 ntBASIC3.73□□□□□ -1.81
DDX4Q9NQI0 CDK8P2-201ENST00000415020 547 ntBASIC3.73□□□□□ -1.81
DDX4Q9NQI0 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.73□□□□□ -1.81
DDX4Q9NQI0 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.73□□□□□ -1.81
DDX4Q9NQI0 CST9LP2-201ENST00000437612 320 ntBASIC3.73□□□□□ -1.81
DDX4Q9NQI0 USP9YP29-201ENST00000445112 563 ntBASIC3.73□□□□□ -1.81
DDX4Q9NQI0 HMGB1P25-201ENST00000468402 607 ntBASIC3.73□□□□□ -1.81
DDX4Q9NQI0 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.73□□□□□ -1.81
DDX4Q9NQI0 AF131216.2-201ENST00000512316 564 ntBASIC3.73□□□□□ -1.81
DDX4Q9NQI0 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
DDX4Q9NQI0 AC022447.1-201ENST00000515358 464 ntBASIC3.73□□□□□ -1.81
DDX4Q9NQI0 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms