Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC011330.2-201ENST00000621680 635 ntBASIC3.08□□□□□ -1.92
HPS4Q9NQG7 AC006927.4-201ENST00000639187 543 ntBASIC3.08□□□□□ -1.92
HPS4Q9NQG7 AC011477.1-204ENST00000623416 1325 ntBASIC3.08□□□□□ -1.92
HPS4Q9NQG7 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
HPS4Q9NQG7 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
HPS4Q9NQG7 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
HPS4Q9NQG7 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.07□□□□□ -1.92
HPS4Q9NQG7 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HPS4Q9NQG7 DEFB108F-201ENST00000344638 222 ntBASIC3.07□□□□□ -1.92
HPS4Q9NQG7 RNU6-289P-201ENST00000364093 107 ntBASIC3.07□□□□□ -1.92
HPS4Q9NQG7 SNORA18.3-201ENST00000384122 132 ntBASIC3.07□□□□□ -1.92
HPS4Q9NQG7 SNORA46-201ENST00000384762 135 ntBASIC3.07□□□□□ -1.92
HPS4Q9NQG7 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
HPS4Q9NQG7 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.07□□□□□ -1.92
HPS4Q9NQG7 RNU6-757P-201ENST00000410334 100 ntBASIC3.07□□□□□ -1.92
HPS4Q9NQG7 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.07□□□□□ -1.92
HPS4Q9NQG7 BMS1P22-201ENST00000414726 313 ntBASIC3.07□□□□□ -1.92
HPS4Q9NQG7 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.07□□□□□ -1.92
HPS4Q9NQG7 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.07□□□□□ -1.92
HPS4Q9NQG7 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.07□□□□□ -1.92
HPS4Q9NQG7 SETP8-201ENST00000435341 628 ntBASIC3.07□□□□□ -1.92
HPS4Q9NQG7 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.07□□□□□ -1.92
HPS4Q9NQG7 SNRPEP7-201ENST00000438350 220 ntBASIC3.07□□□□□ -1.92
HPS4Q9NQG7 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.07□□□□□ -1.92
HPS4Q9NQG7 RPL26P6-201ENST00000440913 438 ntBASIC3.07□□□□□ -1.92
HPS4Q9NQG7 RPS12P18-201ENST00000442381 270 ntBASIC3.07□□□□□ -1.92
HPS4Q9NQG7 UQCRHP3-201ENST00000451503 251 ntBASIC3.07□□□□□ -1.92
HPS4Q9NQG7 AC234775.1-201ENST00000454247 670 ntBASIC3.07□□□□□ -1.92
HPS4Q9NQG7 SNORD121B-201ENST00000458838 81 ntBASIC3.07□□□□□ -1.92
HPS4Q9NQG7 RNA5SP310-201ENST00000459084 116 ntBASIC3.07□□□□□ -1.92
HPS4Q9NQG7 RPS29P12-201ENST00000460178 152 ntBASIC3.07□□□□□ -1.92
HPS4Q9NQG7 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HPS4Q9NQG7 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.07□□□□□ -1.92
HPS4Q9NQG7 AC083906.5-201ENST00000503722 328 ntBASIC3.07□□□□□ -1.92
HPS4Q9NQG7 HIGD1AP13-201ENST00000509878 289 ntBASIC3.07□□□□□ -1.92
HPS4Q9NQG7 AC109464.2-201ENST00000510242 943 ntBASIC3.07□□□□□ -1.92
HPS4Q9NQG7 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.07□□□□□ -1.92
HPS4Q9NQG7 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HPS4Q9NQG7 DEFB108D-201ENST00000527787 222 ntBASIC3.07□□□□□ -1.92
HPS4Q9NQG7 AC087276.1-201ENST00000529659 480 ntBASIC3.07□□□□□ -1.92
HPS4Q9NQG7 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
HPS4Q9NQG7 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.07□□□□□ -1.92
HPS4Q9NQG7 SETP2-201ENST00000553886 926 ntBASIC3.07□□□□□ -1.92
HPS4Q9NQG7 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.07□□□□□ -1.92
HPS4Q9NQG7 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.07□□□□□ -1.92
HPS4Q9NQG7 AP001429.1-201ENST00000602568 530 ntBASIC3.07□□□□□ -1.92
HPS4Q9NQG7 AP002826.1-201ENST00000608835 315 ntBASIC3.07□□□□□ -1.92
HPS4Q9NQG7 AC092106.3-201ENST00000611308 722 ntBASIC3.07□□□□□ -1.92
HPS4Q9NQG7 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.07□□□□□ -1.92
HPS4Q9NQG7 AC079228.1-201ENST00000624774 1049 ntBASIC3.07□□□□□ -1.92
HPS4Q9NQG7 RNU6-359P-201ENST00000365466 108 ntBASIC3.06□□□□□ -1.92
HPS4Q9NQG7 RNU6-1207P-201ENST00000384343 107 ntBASIC3.06□□□□□ -1.92
HPS4Q9NQG7 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
HPS4Q9NQG7 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
HPS4Q9NQG7 SNORA26.7-201ENST00000391288 122 ntBASIC3.06□□□□□ -1.92
HPS4Q9NQG7 RPL7P8-201ENST00000411964 730 ntBASIC3.06□□□□□ -1.92
HPS4Q9NQG7 AC245054.2-201ENST00000415639 319 ntBASIC3.06□□□□□ -1.92
HPS4Q9NQG7 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.06□□□□□ -1.92
HPS4Q9NQG7 AC009487.2-201ENST00000420969 6821 ntBASIC3.06□□□□□ -1.92
HPS4Q9NQG7 HMGN2P30-201ENST00000423237 256 ntBASIC3.06□□□□□ -1.92
HPS4Q9NQG7 BX119904.4-201ENST00000424402 301 ntBASIC3.06□□□□□ -1.92
HPS4Q9NQG7 AC105272.1-201ENST00000438604 198 ntBASIC3.06□□□□□ -1.92
HPS4Q9NQG7 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.06□□□□□ -1.92
HPS4Q9NQG7 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.06□□□□□ -1.92
HPS4Q9NQG7 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.06□□□□□ -1.92
HPS4Q9NQG7 AC104563.1-201ENST00000476147 376 ntBASIC3.06□□□□□ -1.92
HPS4Q9NQG7 HMGB1P36-201ENST00000487709 576 ntBASIC3.06□□□□□ -1.92
HPS4Q9NQG7 AC020699.1-201ENST00000505161 445 ntBASIC3.06□□□□□ -1.92
HPS4Q9NQG7 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.06□□□□□ -1.92
HPS4Q9NQG7 MTCO1P9-201ENST00000505577 1534 ntBASIC3.06□□□□□ -1.92
HPS4Q9NQG7 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.06□□□□□ -1.92
HPS4Q9NQG7 AC024589.1-201ENST00000512207 263 ntBASIC3.06□□□□□ -1.92
HPS4Q9NQG7 AC118465.1-201ENST00000513820 1271 ntBASIC3.06□□□□□ -1.92
HPS4Q9NQG7 SCGB1D5P-201ENST00000515134 247 ntBASIC3.06□□□□□ -1.92
HPS4Q9NQG7 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.06□□□□□ -1.92
HPS4Q9NQG7 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.06□□□□□ -1.92
HPS4Q9NQG7 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.06□□□□□ -1.92
HPS4Q9NQG7 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.06□□□□□ -1.92
HPS4Q9NQG7 CYCSP39-201ENST00000565821 309 ntBASIC3.06□□□□□ -1.92
HPS4Q9NQG7 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.06□□□□□ -1.92
HPS4Q9NQG7 MIR3162-201ENST00000581818 82 ntBASIC3.06□□□□□ -1.92
HPS4Q9NQG7 ELOCP29-201ENST00000588193 334 ntBASIC3.06□□□□□ -1.92
HPS4Q9NQG7 VN1R82P-201ENST00000601481 356 ntBASIC3.06□□□□□ -1.92
HPS4Q9NQG7 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.06□□□□□ -1.92
HPS4Q9NQG7 AL596327.1-201ENST00000603629 213 ntBASIC3.06□□□□□ -1.92
HPS4Q9NQG7 AL158211.4-201ENST00000606988 584 ntBASIC3.06□□□□□ -1.92
HPS4Q9NQG7 AC007318.2-201ENST00000620999 243 ntBASIC3.06□□□□□ -1.92
HPS4Q9NQG7 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.06□□□□□ -1.92
HPS4Q9NQG7 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.06□□□□□ -1.92
HPS4Q9NQG7 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.06□□□□□ -1.92
HPS4Q9NQG7 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
HPS4Q9NQG7 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.05□□□□□ -1.92
HPS4Q9NQG7 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.05□□□□□ -1.92
HPS4Q9NQG7 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.05□□□□□ -1.92
HPS4Q9NQG7 ZNF876P-202ENST00000398732 1485 ntBASIC3.05□□□□□ -1.92
HPS4Q9NQG7 MIR449A-201ENST00000362113 91 ntBASIC3.05□□□□□ -1.92
HPS4Q9NQG7 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.05□□□□□ -1.92
HPS4Q9NQG7 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.05□□□□□ -1.92
HPS4Q9NQG7 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.05□□□□□ -1.92
HPS4Q9NQG7 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms