Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 GLYCAM1-201ENST00000546596 285 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 OR1M4P-201ENST00000589199 287 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 AC004987.4-201ENST00000603383 338 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 AL355877.2-201ENST00000603670 358 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 AC024060.1-201ENST00000607052 494 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 AC103710.4-201ENST00000609301 899 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 AC079395.3-201ENST00000615161 484 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 AL158163.2-201ENST00000619110 700 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 OR1S1-201ENST00000624470 978 ntBASIC2.75□□□□□ -1.97
LRRC40Q9H9A6 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 VTRNA1-1-201ENST00000363120 99 ntBASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 RNU6-97P-201ENST00000363387 104 ntBASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 RNU6-741P-201ENST00000383889 107 ntBASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 MIR592-201ENST00000384959 97 ntBASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 AC092047.1-201ENST00000424997 240 ntBASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 Z82210.1-201ENST00000440037 231 ntBASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 CYCSP32-201ENST00000440548 321 ntBASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 RPS3AP12-201ENST00000443616 753 ntBASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 AC002381.1-201ENST00000447049 280 ntBASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 RPS20P20-201ENST00000460498 340 ntBASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 AC090525.1-201ENST00000479116 478 ntBASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 AC026427.2-201ENST00000506228 536 ntBASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 RNY4P37-201ENST00000516225 96 ntBASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 RPPH1-2P-201ENST00000516688 293 ntBASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 OR6C7P-201ENST00000547875 934 ntBASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 AC007954.1-201ENST00000554198 494 ntBASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 TRAV28-201ENST00000557548 323 ntBASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 CYCSP39-201ENST00000565821 309 ntBASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 AC090616.3-201ENST00000582184 217 ntBASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 AC123767.1-202ENST00000620407 817 ntBASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 AC022336.2-201ENST00000568966 2538 ntBASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 AC080100.1-201ENST00000624239 5356 ntBASIC2.74□□□□□ -1.97
LRRC40Q9H9A6 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 RNU4-51P-201ENST00000364206 140 ntBASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 RNU6-359P-201ENST00000365466 108 ntBASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 RNU6-637P-201ENST00000384050 107 ntBASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 MTND4P13-201ENST00000402078 1023 ntBASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 TIMM9P2-201ENST00000419324 266 ntBASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 AL513175.2-201ENST00000422071 443 ntBASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 AC007919.1-201ENST00000429380 217 ntBASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 GTF2IP20-201ENST00000431663 360 ntBASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 RPL36AP6-201ENST00000435770 321 ntBASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 PIGFP3-201ENST00000441918 722 ntBASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 RPS24P13-201ENST00000442520 397 ntBASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 AIG1P1-201ENST00000503376 148 ntBASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 SUMO2P6-201ENST00000505273 288 ntBASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 MTND3P13-201ENST00000574391 343 ntBASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 AL161729.4-201ENST00000604650 476 ntBASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 AC013476.2-201ENST00000614456 459 ntBASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 AC140725.3-201ENST00000616193 880 ntBASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.73□□□□□ -1.97
LRRC40Q9H9A6 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LRRC40Q9H9A6 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
LRRC40Q9H9A6 AL161781.1-201ENST00000354277 403 ntBASIC2.72□□□□□ -1.97
LRRC40Q9H9A6 SNORA70.4-201ENST00000365509 134 ntBASIC2.72□□□□□ -1.97
LRRC40Q9H9A6 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
LRRC40Q9H9A6 RNU6-217P-201ENST00000384164 104 ntBASIC2.72□□□□□ -1.97
LRRC40Q9H9A6 RNU6-1207P-201ENST00000384343 107 ntBASIC2.72□□□□□ -1.97
LRRC40Q9H9A6 U3.20-201ENST00000390909 217 ntBASIC2.72□□□□□ -1.97
LRRC40Q9H9A6 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 150.1 ms