Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.12□□□□□ -1.91
RPAP3Q9H6T3 OOSP1P1-201ENST00000423265 274 ntBASIC3.12□□□□□ -1.91
RPAP3Q9H6T3 MYL8P-204ENST00000431574 518 ntBASIC3.12□□□□□ -1.91
RPAP3Q9H6T3 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.12□□□□□ -1.91
RPAP3Q9H6T3 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.12□□□□□ -1.91
RPAP3Q9H6T3 RAC1P7-201ENST00000445367 377 ntBASIC3.12□□□□□ -1.91
RPAP3Q9H6T3 MTCO2P25-201ENST00000447065 681 ntBASIC3.12□□□□□ -1.91
RPAP3Q9H6T3 AL009048.1-201ENST00000450437 298 ntBASIC3.12□□□□□ -1.91
RPAP3Q9H6T3 AL353691.1-201ENST00000451332 387 ntBASIC3.12□□□□□ -1.91
RPAP3Q9H6T3 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.12□□□□□ -1.91
RPAP3Q9H6T3 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.12□□□□□ -1.91
RPAP3Q9H6T3 AC114981.1-201ENST00000503897 678 ntBASIC3.12□□□□□ -1.91
RPAP3Q9H6T3 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RPAP3Q9H6T3 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.12□□□□□ -1.91
RPAP3Q9H6T3 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.12□□□□□ -1.91
RPAP3Q9H6T3 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.12□□□□□ -1.91
RPAP3Q9H6T3 AC093677.1-201ENST00000514414 678 ntBASIC3.12□□□□□ -1.91
RPAP3Q9H6T3 AC022861.1-201ENST00000522981 663 ntBASIC3.12□□□□□ -1.91
RPAP3Q9H6T3 CR383656.7-201ENST00000548164 174 ntBASIC3.12□□□□□ -1.91
RPAP3Q9H6T3 AC091544.4-201ENST00000555268 342 ntBASIC3.12□□□□□ -1.91
RPAP3Q9H6T3 BNIP3P39-201ENST00000601077 554 ntBASIC3.12□□□□□ -1.91
RPAP3Q9H6T3 DUXAP3-201ENST00000603616 594 ntBASIC3.12□□□□□ -1.91
RPAP3Q9H6T3 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC3.12□□□□□ -1.91
RPAP3Q9H6T3 AC131235.4-201ENST00000609288 620 ntBASIC3.12□□□□□ -1.91
RPAP3Q9H6T3 AL020991.1-201ENST00000612314 373 ntBASIC3.12□□□□□ -1.91
RPAP3Q9H6T3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RPAP3Q9H6T3 ASNSP3-201ENST00000451989 1306 ntBASIC3.12□□□□□ -1.91
RPAP3Q9H6T3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
RPAP3Q9H6T3 ZNF519P1-201ENST00000449011 1626 ntBASIC3.11□□□□□ -1.91
RPAP3Q9H6T3 AC097714.1-201ENST00000511272 1647 ntBASIC3.11□□□□□ -1.91
RPAP3Q9H6T3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.11□□□□□ -1.91
RPAP3Q9H6T3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
RPAP3Q9H6T3 MIR135A2-201ENST00000384854 100 ntBASIC3.11□□□□□ -1.91
RPAP3Q9H6T3 MTATP6P27-201ENST00000416987 621 ntBASIC3.11□□□□□ -1.91
RPAP3Q9H6T3 ATP5F1P1-201ENST00000433775 569 ntBASIC3.11□□□□□ -1.91
RPAP3Q9H6T3 MTCO3P11-201ENST00000455103 774 ntBASIC3.11□□□□□ -1.91
RPAP3Q9H6T3 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.11□□□□□ -1.91
RPAP3Q9H6T3 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.11□□□□□ -1.91
RPAP3Q9H6T3 RAC1P5-201ENST00000512182 576 ntBASIC3.11□□□□□ -1.91
RPAP3Q9H6T3 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RPAP3Q9H6T3 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
RPAP3Q9H6T3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.11□□□□□ -1.91
RPAP3Q9H6T3 MED28P6-201ENST00000558776 231 ntBASIC3.11□□□□□ -1.91
RPAP3Q9H6T3 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RPAP3Q9H6T3 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.11□□□□□ -1.91
RPAP3Q9H6T3 AL031176.1-201ENST00000604554 466 ntBASIC3.11□□□□□ -1.91
RPAP3Q9H6T3 AC008277.2-201ENST00000605196 797 ntBASIC3.11□□□□□ -1.91
RPAP3Q9H6T3 RNU4-5P-201ENST00000607255 135 ntBASIC3.11□□□□□ -1.91
RPAP3Q9H6T3 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.11□□□□□ -1.91
RPAP3Q9H6T3 AC116618.1-201ENST00000634617 774 ntBASIC3.11□□□□□ -1.91
RPAP3Q9H6T3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RPAP3Q9H6T3 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.11□□□□□ -1.91
RPAP3Q9H6T3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
RPAP3Q9H6T3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
RPAP3Q9H6T3 VTRNA1-1-201ENST00000363120 99 ntBASIC3.1□□□□□ -1.91
RPAP3Q9H6T3 Y_RNA.548-201ENST00000384656 105 ntBASIC3.1□□□□□ -1.91
RPAP3Q9H6T3 RPL21P3-201ENST00000395517 478 ntBASIC3.1□□□□□ -1.91
RPAP3Q9H6T3 MTND4P13-201ENST00000402078 1023 ntBASIC3.1□□□□□ -1.91
RPAP3Q9H6T3 AL356131.1-201ENST00000405826 414 ntBASIC3.1□□□□□ -1.91
RPAP3Q9H6T3 RPL7P36-201ENST00000444633 681 ntBASIC3.1□□□□□ -1.91
RPAP3Q9H6T3 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.1□□□□□ -1.91
RPAP3Q9H6T3 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.1□□□□□ -1.91
RPAP3Q9H6T3 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.1□□□□□ -1.91
RPAP3Q9H6T3 UBE2V1P12-201ENST00000503954 474 ntBASIC3.1□□□□□ -1.91
RPAP3Q9H6T3 AC006499.2-201ENST00000513470 337 ntBASIC3.1□□□□□ -1.91
RPAP3Q9H6T3 RPPH1-2P-201ENST00000516688 293 ntBASIC3.1□□□□□ -1.91
RPAP3Q9H6T3 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.1□□□□□ -1.91
RPAP3Q9H6T3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RPAP3Q9H6T3 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
RPAP3Q9H6T3 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.1□□□□□ -1.91
RPAP3Q9H6T3 AL512347.1-201ENST00000566420 503 ntBASIC3.1□□□□□ -1.91
RPAP3Q9H6T3 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.1□□□□□ -1.91
RPAP3Q9H6T3 AL359198.2-201ENST00000611836 194 ntBASIC3.1□□□□□ -1.91
RPAP3Q9H6T3 AC231657.1-201ENST00000624313 397 ntBASIC3.1□□□□□ -1.91
RPAP3Q9H6T3 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.1□□□□□ -1.91
RPAP3Q9H6T3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.1□□□□□ -1.91
RPAP3Q9H6T3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
RPAP3Q9H6T3 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.1□□□□□ -1.91
RPAP3Q9H6T3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.09□□□□□ -1.91
RPAP3Q9H6T3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.09□□□□□ -1.91
RPAP3Q9H6T3 FRG1BP-201ENST00000278882 761 ntBASIC3.09□□□□□ -1.91
RPAP3Q9H6T3 AL136372.1-201ENST00000403060 228 ntBASIC3.09□□□□□ -1.91
RPAP3Q9H6T3 HMGB1P17-201ENST00000403495 628 ntBASIC3.09□□□□□ -1.91
RPAP3Q9H6T3 RPS15AP38-201ENST00000413110 372 ntBASIC3.09□□□□□ -1.91
RPAP3Q9H6T3 TIMM9P2-201ENST00000419324 266 ntBASIC3.09□□□□□ -1.91
RPAP3Q9H6T3 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.09□□□□□ -1.91
RPAP3Q9H6T3 AL139421.1-201ENST00000423010 169 ntBASIC3.09□□□□□ -1.91
RPAP3Q9H6T3 USP9YP11-201ENST00000427537 717 ntBASIC3.09□□□□□ -1.91
RPAP3Q9H6T3 MTND4P6-201ENST00000438297 472 ntBASIC3.09□□□□□ -1.91
RPAP3Q9H6T3 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.09□□□□□ -1.91
RPAP3Q9H6T3 ZNF886P-201ENST00000450781 723 ntBASIC3.09□□□□□ -1.91
RPAP3Q9H6T3 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.09□□□□□ -1.91
RPAP3Q9H6T3 AC134050.1-201ENST00000495088 933 ntBASIC3.09□□□□□ -1.91
RPAP3Q9H6T3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.09□□□□□ -1.91
RPAP3Q9H6T3 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.09□□□□□ -1.91
RPAP3Q9H6T3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.09□□□□□ -1.91
RPAP3Q9H6T3 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RPAP3Q9H6T3 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.09□□□□□ -1.91
RPAP3Q9H6T3 AP001269.3-201ENST00000588718 329 ntBASIC3.09□□□□□ -1.91
RPAP3Q9H6T3 VN1R78P-201ENST00000597393 564 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms