Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.82□□□□□ -1.64
FOXP3Q9BZS1 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
FOXP3Q9BZS1 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.82□□□□□ -1.64
FOXP3Q9BZS1 RN7SL176P-201ENST00000580352 264 ntBASIC4.82□□□□□ -1.64
FOXP3Q9BZS1 MIR4680-201ENST00000580906 66 ntBASIC4.82□□□□□ -1.64
FOXP3Q9BZS1 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.82□□□□□ -1.64
FOXP3Q9BZS1 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.82□□□□□ -1.64
FOXP3Q9BZS1 AC012409.4-201ENST00000612923 249 ntBASIC4.82□□□□□ -1.64
FOXP3Q9BZS1 AL023881.1-201ENST00000621088 301 ntBASIC4.82□□□□□ -1.64
FOXP3Q9BZS1 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
FOXP3Q9BZS1 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.82□□□□□ -1.64
FOXP3Q9BZS1 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.82□□□□□ -1.64
FOXP3Q9BZS1 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
FOXP3Q9BZS1 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
FOXP3Q9BZS1 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.82□□□□□ -1.64
FOXP3Q9BZS1 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
FOXP3Q9BZS1 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
FOXP3Q9BZS1 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
FOXP3Q9BZS1 IQCB2P-201ENST00000401788 1633 ntBASIC4.82□□□□□ -1.64
FOXP3Q9BZS1 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
FOXP3Q9BZS1 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
FOXP3Q9BZS1 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 Y_RNA.5-201ENST00000362334 102 ntBASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 RNU6-1115P-201ENST00000362490 106 ntBASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 RNU6-310P-201ENST00000384655 107 ntBASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 RNU6-754P-201ENST00000391166 107 ntBASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 AL109755.1-201ENST00000401791 649 ntBASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 RPL7P10-201ENST00000417407 739 ntBASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 EIF4EP1-201ENST00000422311 642 ntBASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 AC018865.2-201ENST00000423631 129 ntBASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 DNAJC19P7-201ENST00000428811 344 ntBASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 AC093414.1-201ENST00000434712 514 ntBASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 RPL23AP89-201ENST00000439324 255 ntBASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 OR1H1P-201ENST00000448731 937 ntBASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 BTF3P15-201ENST00000455606 336 ntBASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 RPL21P8-201ENST00000465083 535 ntBASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 FTH1P2-201ENST00000466086 412 ntBASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 RPS27AP1-201ENST00000475545 471 ntBASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 AC108078.2-201ENST00000510750 236 ntBASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 AC083806.3-201ENST00000614016 455 ntBASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 MIR6780A-201ENST00000615089 68 ntBASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
FOXP3Q9BZS1 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 ZNF519P1-201ENST00000449011 1626 ntBASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 AC079741.1-201ENST00000321498 212 ntBASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 RNU6-1284P-201ENST00000363701 100 ntBASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 RNU6-593P-201ENST00000364716 112 ntBASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 RNU6-1040P-201ENST00000383974 107 ntBASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 RNU6-1032P-201ENST00000384100 107 ntBASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 RNU6-1127P-201ENST00000384580 107 ntBASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 RPL30P2-201ENST00000414021 291 ntBASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 CALM2P2-201ENST00000428512 440 ntBASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 RPL21P91-201ENST00000429231 479 ntBASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 AC016712.1-201ENST00000431088 378 ntBASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 AC091390.1-201ENST00000433904 331 ntBASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 RPL21P112-201ENST00000434403 463 ntBASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 RPS15AP27-201ENST00000449183 343 ntBASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 SCARNA18-201ENST00000459004 134 ntBASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 MIR2053-201ENST00000459295 91 ntBASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 AC008526.1-201ENST00000509149 338 ntBASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 HIGD1AP13-201ENST00000509878 289 ntBASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 RNU6-685P-201ENST00000517088 95 ntBASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 AC100870.1-201ENST00000522035 505 ntBASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 DEFB108D-201ENST00000527787 222 ntBASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 AP001880.2-201ENST00000538233 448 ntBASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 AL121576.1-201ENST00000556055 276 ntBASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 AC091178.1-203ENST00000584586 279 ntBASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 AC022726.1-201ENST00000587475 207 ntBASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 AL138726.1-201ENST00000614873 333 ntBASIC4.8□□□□□ -1.64
FOXP3Q9BZS1 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms