Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 AL157871.3-201ENST00000557231 293 ntBASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 RPL10P14-201ENST00000565265 298 ntBASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 AC136624.4-201ENST00000573044 370 ntBASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 MIR4260-201ENST00000583107 67 ntBASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 NF1P5-201ENST00000588287 448 ntBASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 AC012616.1-201ENST00000600294 197 ntBASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 AL133481.2-203ENST00000607558 139 ntBASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 AC069294.1-201ENST00000608397 350 ntBASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 AL161616.1-201ENST00000611867 286 ntBASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 AC109583.2-201ENST00000617367 129 ntBASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 AL035470.1-201ENST00000622571 220 ntBASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 MVP-219ENST00000629059 120 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 U6.114-201ENST00000636407 96 ntBASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 AC006160.2-201ENST00000637708 154 ntBASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 AC015799.1-201ENST00000622996 3122 ntBASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-3Q9BYR4 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 AC002543.1-201ENST00000299783 1954 ntBASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 PROS2P-201ENST00000474651 1951 ntBASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU6-633P-201ENST00000362612 103 ntBASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU6-179P-201ENST00000363350 107 ntBASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU6-1066P-201ENST00000363573 105 ntBASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 U8.4-201ENST00000363626 134 ntBASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU5F-3P-201ENST00000363767 117 ntBASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU6-219P-201ENST00000364728 107 ntBASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU1-133P-201ENST00000364867 167 ntBASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 Y_RNA.316-201ENST00000365118 111 ntBASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 RNA5-8SP5-201ENST00000365304 152 ntBASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 SNORD115-7-201ENST00000365306 82 ntBASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 SNORA70H-201ENST00000383910 135 ntBASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 Y_RNA.393-201ENST00000383936 102 ntBASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 Y_RNA.399-201ENST00000383955 105 ntBASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU6-641P-201ENST00000384006 107 ntBASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU6-643P-201ENST00000384018 107 ntBASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 RNY3P5-201ENST00000384127 102 ntBASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 SNORA70J-201ENST00000384182 135 ntBASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 SNORA70-201ENST00000384436 135 ntBASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 MIR16-1-201ENST00000385271 89 ntBASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 RNU4-69P-201ENST00000410677 143 ntBASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 HMGA1P8-201ENST00000414130 321 ntBASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 RPL32P35-201ENST00000415214 394 ntBASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 MLLT10P1-201ENST00000418346 262 ntBASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 AL358453.1-201ENST00000422522 250 ntBASIC1.87□□□□□ -2.11
KRTAP4-3Q9BYR4 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms